Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RPL30P12-201ENST00000474666 353 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 RNU6-1314P-201ENST00000517139 104 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC104576.1-201ENST00000524225 88 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC026371.1-201ENST00000551867 419 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC060780.3-201ENST00000589464 80 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC104237.2-201ENST00000612456 443 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 uc_338.15-201ENST00000615470 191 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AL355365.1-201ENST00000616480 294 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AC009033.1-201ENST00000624279 431 ntBASIC2.72□□□□□ -1.97
NR1H4Q96RI1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.72□□□□□ -1.97
NR1H4Q96RI1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 PTMAP2-201ENST00000397627 327 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 RPS29P13-201ENST00000402041 169 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 RNA5SP181-201ENST00000410246 98 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 VN1R36P-201ENST00000414936 291 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 MTND4LP16-201ENST00000440828 295 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AC007969.2-201ENST00000441891 191 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 RPL39P29-201ENST00000447779 157 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 U8.21-201ENST00000459536 136 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AC073901.1-201ENST00000462471 408 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 CKS1BP2-201ENST00000497342 240 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 RNA5SP367-201ENST00000516557 118 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AC100830.2-201ENST00000581636 240 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AC018638.8-201ENST00000588755 281 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 AC009314.1-201ENST00000603871 304 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.71□□□□□ -1.98
NR1H4Q96RI1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
NR1H4Q96RI1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 Y_RNA.86-201ENST00000363020 111 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 RNU6-933P-201ENST00000384424 107 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 SNORD15B-201ENST00000384714 146 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 MIR186-201ENST00000384988 86 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 MIR134-201ENST00000385258 73 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AL139413.1-201ENST00000421309 217 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AC069439.1-201ENST00000494739 167 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AC025465.4-201ENST00000513422 638 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 RNU6-256P-201ENST00000516747 97 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 MIR1254-2-201ENST00000579553 63 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 ELOCP5-201ENST00000604924 333 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AL670379.2-201ENST00000604983 252 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 FAM157A-202ENST00000615155 405 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AC091953.5-201ENST00000622919 233 ntBASIC2.7□□□□□ -1.98
NR1H4Q96RI1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NR1H4Q96RI1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NR1H4Q96RI1 RNU6-655P-201ENST00000362858 107 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 RNU6-220P-201ENST00000390919 107 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AL513185.2-201ENST00000425543 193 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.69□□□□□ -1.98
NR1H4Q96RI1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC243964.1-201ENST00000441814 261 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.69□□□□□ -1.98
NR1H4Q96RI1 RNU7-66P-201ENST00000459469 62 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 SNRPGP7-201ENST00000469016 106 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC140059.1-201ENST00000489238 361 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 RPS27P27-201ENST00000498779 255 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC018710.1-201ENST00000506509 158 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.69□□□□□ -1.98
NR1H4Q96RI1 RNU2-53P-201ENST00000516257 147 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 RNA5SP402-201ENST00000517148 110 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 RN7SKP256-201ENST00000517201 314 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC009812.2-201ENST00000517657 457 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC109329.2-201ENST00000519658 482 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC115990.1-201ENST00000526957 301 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AP002404.1-201ENST00000532005 451 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC091135.1-201ENST00000585943 307 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 RBM11P1-201ENST00000604951 799 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AC005046.1-201ENST00000608515 625 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 AL136221.1-201ENST00000621449 509 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms