Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AL606753.1-201ENST00000427435 87 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 BX679664.1-201ENST00000434429 253 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC092798.1-201ENST00000458542 409 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC025518.1-201ENST00000479856 347 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC106707.2-201ENST00000484182 374 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 RPL32P34-201ENST00000486380 400 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC090617.3-201ENST00000573670 475 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 MIR4643-201ENST00000577473 78 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC007390.2-201ENST00000606229 3803 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AC018555.1-201ENST00000567548 1980 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-879P-201ENST00000364328 108 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RNA5SP267-201ENST00000364893 126 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-662P-201ENST00000384253 104 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-166P-201ENST00000384371 107 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-843P-201ENST00000384454 104 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-102P-201ENST00000384485 104 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 UBA52P6-201ENST00000399822 382 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RNU2-68P-201ENST00000410878 191 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RPS29P4-201ENST00000414733 161 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 AC011742.1-201ENST00000431448 434 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 HMGB1P37-201ENST00000439613 609 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 BX510359.1-201ENST00000456973 237 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 snoU13.30-201ENST00000458951 104 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RPS26P21-201ENST00000475397 348 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 SNORA31.18-201ENST00000517043 134 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 MED28P6-201ENST00000558776 231 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 AC005046.1-201ENST00000608515 625 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 U2.14-201ENST00000615943 113 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.36□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-858P-201ENST00000362436 107 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 SNORA40C-201ENST00000391285 128 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 MTATP6P29-201ENST00000415057 132 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 Z85995.1-201ENST00000415547 335 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 AL353705.4-201ENST00000449661 238 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 RPL23AP49-201ENST00000492925 468 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 MRPS36P4-201ENST00000534436 298 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 MIR3921-201ENST00000577308 85 ntBASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNGAP1Q96PV0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 RNU4-9P-201ENST00000364951 139 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-968P-201ENST00000384076 107 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 SNORA53-201ENST00000391141 249 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 SNORD58.1-201ENST00000391313 66 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 COX6CP10-201ENST00000416832 224 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AC013470.1-201ENST00000453438 462 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AL136097.1-201ENST00000456945 913 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 RPS23P5-201ENST00000495419 428 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 RPL31P61-201ENST00000496160 376 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AC104619.4-201ENST00000510773 249 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 RN7SKP18-201ENST00000516005 275 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 Y_RNA.703-201ENST00000516846 111 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-255P-201ENST00000516957 105 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AC060766.3-201ENST00000591442 263 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 RNU1-30P-201ENST00000606575 163 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 AC091903.1-201ENST00000624322 454 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 U4.7-201ENST00000638126 106 ntBASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SYNGAP1Q96PV0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SYNGAP1Q96PV0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms