Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC026271.5-201ENST00000577873 130 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AC243960.4-201ENST00000600532 288 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AL353778.1-201ENST00000603149 408 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 SNRPGP17-201ENST00000603780 214 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AL670379.4-201ENST00000605279 254 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 Z82243.1-201ENST00000609432 473 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 U8.3-201ENST00000363321 132 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 RNU6-169P-201ENST00000365336 107 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 Y_RNA.560-201ENST00000384689 102 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 MTCYBP5-201ENST00000423752 1135 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AL591806.2-201ENST00000433122 173 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 HMGB1P31-201ENST00000437242 427 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 RPL7P54-201ENST00000438336 674 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 MTND6P13-201ENST00000443510 523 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AC007677.1-201ENST00000445757 515 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 snoU13.14-201ENST00000459372 104 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 MTCO3P9-201ENST00000506989 781 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 ZNF321P-202ENST00000550843 495 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 MTND1P24-201ENST00000552175 861 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AC092354.1-201ENST00000606057 376 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AL773524.1-201ENST00000614065 229 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AC084768.2-201ENST00000622736 221 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AC093648.1-201ENST00000623546 606 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
RPRD1AQ96P16 FARSBP1-201ENST00000435808 1778 ntBASIC1.85□□□□□ -2.11
RPRD1AQ96P16 AP006437.1-201ENST00000641440 3685 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RNU6-212P-201ENST00000362642 104 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RNU6-179P-201ENST00000363350 107 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RNU6-1210P-201ENST00000363775 107 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RNU6-944P-201ENST00000364023 107 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RNY1P12-201ENST00000364251 105 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 MIR1294-201ENST00000408503 142 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RNA5SP390-201ENST00000410191 113 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RNU2-8P-201ENST00000410727 190 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RNU2-32P-201ENST00000411193 191 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AL365400.1-201ENST00000431854 640 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AP005639.2-201ENST00000527592 928 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AC073539.2-201ENST00000597113 165 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 RMST_7.1-201ENST00000621935 268 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 AL359757.2-201ENST00000624309 274 ntBASIC1.84□□□□□ -2.11
RPRD1AQ96P16 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
RPRD1AQ96P16 MTND4P4-201ENST00000439033 1366 ntBASIC1.84□□□□□ -2.12
RPRD1AQ96P16 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
RPRD1AQ96P16 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
RPRD1AQ96P16 SNORD56.1-201ENST00000362913 68 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 Y_RNA.576-201ENST00000384781 102 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 MIR764-201ENST00000390811 85 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 CBX3P9-201ENST00000402326 552 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AL033519.2-201ENST00000403958 392 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 MIR1262-201ENST00000408276 93 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AL451074.3-201ENST00000437709 472 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC104058.1-201ENST00000448028 297 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AL353752.1-201ENST00000454946 260 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC116562.3-201ENST00000506136 177 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 MTND3P25-201ENST00000509243 135 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.83□□□□□ -2.12
RPRD1AQ96P16 RNU6-759P-201ENST00000516740 103 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC090572.1-201ENST00000519251 160 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC106038.2-201ENST00000520706 568 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC068587.5-201ENST00000528506 175 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC008015.1-201ENST00000555505 465 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC078795.2-201ENST00000602835 1252 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC090578.1-201ENST00000604955 591 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms