Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 IMMP1LP2-201ENST00000552954 492 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AL158211.1-201ENST00000566763 763 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF560Q96MR9 Z84480.1-201ENST00000605131 311 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AC073114.1-201ENST00000612027 490 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AC008147.4-201ENST00000617570 1204 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AC009161.2-201ENST00000624626 138 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ZNF560Q96MR9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ZNF560Q96MR9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF560Q96MR9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ZNF560Q96MR9 SNORD114-1-201ENST00000362705 72 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AL079342.1-201ENST00000401460 267 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 RNU4-46P-201ENST00000410818 138 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 RN7SKP142-201ENST00000411236 328 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 EDDM3CP-201ENST00000415977 425 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF560Q96MR9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AL031667.1-201ENST00000440222 725 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 GPM6BP3-201ENST00000442797 145 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AL162395.1-201ENST00000457882 422 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.2□□□□□ -2.06
ZNF560Q96MR9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF560Q96MR9 MTCYBP40-201ENST00000509390 1135 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 RNA5SP503-201ENST00000517047 117 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF560Q96MR9 MIR3126-201ENST00000577443 74 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AC087752.4-201ENST00000605911 462 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AC008945.2-201ENST00000606056 604 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AC009090.3-201ENST00000616553 565 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AC099842.1-201ENST00000619919 596 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF560Q96MR9 ZNF355P-201ENST00000427301 3216 ntBASIC2.2□□□□□ -2.06
ZNF560Q96MR9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ZNF560Q96MR9 SNORA25B-201ENST00000365507 128 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZNF560Q96MR9 RNU6-1029P-201ENST00000384109 107 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 RNU6-456P-201ENST00000384493 107 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 RNU6-606P-201ENST00000384721 111 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 BTF3L4P1-201ENST00000413813 468 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 GMFBP1-201ENST00000467831 427 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.19□□□□□ -2.06
ZNF560Q96MR9 YWHAEP4-201ENST00000505390 198 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF560Q96MR9 LRRC34P2-201ENST00000514850 553 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 RNU6-586P-201ENST00000517265 104 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AC093249.1-201ENST00000567049 203 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AC040904.1-201ENST00000590850 223 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AC068790.2-201ENST00000602601 557 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 Z99497.2-201ENST00000603634 310 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AC007792.1-201ENST00000623023 402 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AC002543.1-201ENST00000299783 1954 ntBASIC2.19□□□□□ -2.06
ZNF560Q96MR9 AL390237.1-201ENST00000404226 1415 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.18□□□□□ -2.06
ZNF560Q96MR9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RNU6-655P-201ENST00000362858 107 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RNU6-78P-201ENST00000362897 107 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RNU6-1210P-201ENST00000363775 107 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RNU6-715P-201ENST00000365204 103 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RNU5E-7P-201ENST00000365290 117 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RNU6-1032P-201ENST00000384100 107 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 CBX3P9-201ENST00000402326 552 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 GSTA9P-201ENST00000406231 611 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AL139156.1-201ENST00000412785 841 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AL669831.1-202ENST00000428504 417 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 CETN4P-201ENST00000432407 469 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 GTF2IP13-201ENST00000438487 386 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.18□□□□□ -2.06
ZNF560Q96MR9 MTND2P4-201ENST00000445034 1004 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AC132479.1-201ENST00000449160 144 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AC098826.2-201ENST00000452011 651 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 snoU13.26-201ENST00000459452 105 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AL121594.1-201ENST00000475906 575 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AC018868.1-201ENST00000491307 315 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AC090255.1-201ENST00000495779 349 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RPL38P4-201ENST00000502376 214 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RNU6-1178P-201ENST00000516674 107 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 MTCO2P4-201ENST00000517968 247 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AP000873.5-201ENST00000533906 236 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.18□□□□□ -2.06
ZNF560Q96MR9 MIR3913-1-201ENST00000577744 102 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 Z69720.2-201ENST00000624755 279 ntBASIC2.18□□□□□ -2.06
ZNF560Q96MR9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
ZNF560Q96MR9 SNORD56.1-201ENST00000362913 68 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 AL591034.2-201ENST00000402839 359 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 HMGB3P2-201ENST00000411913 584 ntBASIC2.17□□□□□ -2.06
ZNF560Q96MR9 RPS29P15-201ENST00000458329 171 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms