Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-835P-201ENST00000516974 104 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 RNA5SP503-201ENST00000517047 117 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC104383.1-201ENST00000530297 370 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 BNIP3P6-201ENST00000549284 499 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC004223.2-201ENST00000590309 544 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC002984.1-201ENST00000591692 448 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AL391813.1-201ENST00000603098 260 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC008536.2-201ENST00000607284 349 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AL354950.2-201ENST00000617939 290 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 AC124864.2-201ENST00000624736 186 ntBASIC1.64□□□□□ -2.15
LINC00477Q96M19 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC00477Q96M19 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LINC00477Q96M19 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC00477Q96M19 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC00477Q96M19 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC00477Q96M19 RNA5SP289-201ENST00000362332 137 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 RNU6-1287P-201ENST00000362914 107 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 RNU6-1120P-201ENST00000362988 108 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 Y_RNA.167-201ENST00000363735 109 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 RNU1-148P-201ENST00000384472 162 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 RNU6-1060P-201ENST00000384664 107 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 MIR221-201ENST00000385135 110 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 MTCO3P40-201ENST00000392516 676 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 RPL7P54-201ENST00000438336 674 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 HIGD1AP2-201ENST00000446367 280 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 RNU7-182P-201ENST00000459009 62 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 RPL7P43-201ENST00000478876 753 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AL049873.1-201ENST00000480540 376 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC068781.1-201ENST00000488231 618 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC116655.1-201ENST00000508324 901 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 RNU2-69P-201ENST00000516061 100 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 SNORA40.12-201ENST00000516329 111 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 RNU6-143P-201ENST00000516942 93 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 ACA59.2-201ENST00000517061 156 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 RANP3-201ENST00000530970 276 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 SNRPGP18-201ENST00000553000 214 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 HIF1AP1-201ENST00000553642 175 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC245505.1-201ENST00000556398 224 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC007151.1-201ENST00000572774 483 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 LRRC37A5P-203ENST00000580181 585 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 MIR4424-201ENST00000585257 86 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC068790.2-201ENST00000602601 557 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC146944.4-201ENST00000602697 718 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC005034.5-201ENST00000604219 466 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC093788.1-201ENST00000609356 927 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC017083.3-201ENST00000609955 700 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AC011939.3-201ENST00000613686 466 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 AL359880.1-201ENST00000621879 266 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 SEPT14P19-203ENST00000633205 211 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 ADAM3A-203ENST00000461344 2157 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 ZNF658B-202ENST00000615961 3375 ntBASIC1.63□□□□□ -2.15
LINC00477Q96M19 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LINC00477Q96M19 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 Y_RNA.38-201ENST00000362617 102 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 RNA5SP125-201ENST00000364843 120 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 RNU6-395P-201ENST00000365662 106 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 RNU5A-6P-201ENST00000384136 116 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 RNU6-72P-201ENST00000384285 79 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 RNU6-45P-201ENST00000384471 107 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 MIR301A-201ENST00000385261 86 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 SNORD70.1-201ENST00000391007 85 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AL512604.1-201ENST00000404812 257 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 NDUFB4P4-201ENST00000404822 243 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 MIR548F1-201ENST00000408667 84 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 RNU6-1068P-201ENST00000410958 103 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 HMGB3P2-201ENST00000411913 584 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 USP9YP6-201ENST00000413550 854 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 AL353621.1-201ENST00000418219 243 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LINC00477Q96M19 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 RNU6-261P-201ENST00000459506 102 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AC025033.1-201ENST00000463883 194 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 GMFBP1-201ENST00000467831 427 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 RNU6-720P-201ENST00000516363 108 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms