Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.61□□□□□ -1.83
CHFRQ96EP1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.61□□□□□ -1.83
CHFRQ96EP1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHFRQ96EP1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHFRQ96EP1 Y_RNA.83-201ENST00000363005 113 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 RNU6-704P-201ENST00000364162 103 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 RNU6-516P-201ENST00000411381 104 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 RNA5SP111-201ENST00000411386 101 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 FABP5P13-201ENST00000452144 328 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 RPS29P26-201ENST00000477483 171 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 RPL21P13-201ENST00000488305 481 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 AC018437.1-201ENST00000492214 406 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 SNORA31.6-201ENST00000516241 130 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 Y_RNA.687-201ENST00000516558 91 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 AC100870.1-201ENST00000522035 505 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 AC012119.1-201ENST00000603184 222 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 MZT1P2-201ENST00000604387 248 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 BX284668.6-201ENST00000606899 438 ntBASIC3.6□□□□□ -1.83
CHFRQ96EP1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHFRQ96EP1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHFRQ96EP1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CHFRQ96EP1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC118273.1-201ENST00000525324 3006 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHFRQ96EP1 Y_RNA.16-201ENST00000362421 102 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 RNU6-1266P-201ENST00000362794 105 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 SNORA38.1-201ENST00000364172 131 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 MIR613-201ENST00000385248 95 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC092809.3-201ENST00000415453 231 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.59□□□□□ -1.83
CHFRQ96EP1 COX6CP10-201ENST00000416832 224 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.59□□□□□ -1.83
CHFRQ96EP1 RPL35AP22-201ENST00000436855 335 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.59□□□□□ -1.83
CHFRQ96EP1 Z75741.1-201ENST00000446793 314 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.59□□□□□ -1.83
CHFRQ96EP1 SNORA59A-201ENST00000459326 152 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 RNU7-138P-201ENST00000459479 64 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC008716.1-201ENST00000511084 513 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 PHBP14-201ENST00000512887 367 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 SNORA25.14-201ENST00000516481 132 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
CHFRQ96EP1 RPS29P30-201ENST00000600975 111 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC008962.1-201ENST00000605729 304 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC006329.2-201ENST00000611491 394 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AC002076.2-201ENST00000617362 122 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 AP000560.1-201ENST00000624150 1937 ntBASIC3.59□□□□□ -1.83
CHFRQ96EP1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHFRQ96EP1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CHFRQ96EP1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.59□□□□□ -1.84
CHFRQ96EP1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHFRQ96EP1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHFRQ96EP1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHFRQ96EP1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 RNU6-81P-201ENST00000365608 104 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 RNU6-701P-201ENST00000384059 107 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 MIR625-201ENST00000385047 85 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 SNORD73A-201ENST00000386062 65 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 RNU6-754P-201ENST00000391166 107 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 U3.29-201ENST00000391296 212 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 SNORA48.8-201ENST00000391324 134 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 RPL21P24-201ENST00000413752 448 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 YPEL5P1-201ENST00000419731 367 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AC096920.1-201ENST00000423991 241 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 AC006483.1-201ENST00000487308 313 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 RNU6-1338P-201ENST00000516328 91 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 SNORD59.2-201ENST00000516873 68 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 AP002392.1-201ENST00000537692 208 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 AC067852.3-201ENST00000589177 561 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AL158827.2-201ENST00000602494 330 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AL670379.6-201ENST00000603753 252 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AL670379.1-201ENST00000604752 252 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AL670379.5-201ENST00000605253 252 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AL670379.8-201ENST00000605353 252 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AL670379.7-201ENST00000605823 252 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 AL691447.3-201ENST00000635020 330 ntBASIC3.58□□□□□ -1.84
CHFRQ96EP1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.58□□□□□ -1.84
CHFRQ96EP1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHFRQ96EP1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms