Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 RNU6-498P-201ENST00000459468 107 ntBASIC0.37□□□□□ -2.35
SPTSSAQ969W0 COX6CP6-201ENST00000490840 228 ntBASIC0.37□□□□□ -2.35
SPTSSAQ969W0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 MIR4666A-201ENST00000580160 79 ntBASIC0.37□□□□□ -2.35
SPTSSAQ969W0 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
SPTSSAQ969W0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SPTSSAQ969W0 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 RNU6-655P-201ENST00000362858 107 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 RNU6-114P-201ENST00000384704 105 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 MIR520A-201ENST00000384862 85 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 SNRPEP7-201ENST00000438350 220 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 GTF2IP13-201ENST00000438487 386 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 RPS27AP8-201ENST00000452665 445 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 BTF3P15-201ENST00000455606 336 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 RN7SKP258-201ENST00000517151 304 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 SNORA70.22-201ENST00000517160 124 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 AC090142.3-201ENST00000519012 385 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 AL137100.2-201ENST00000555786 315 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 HMGB1P33-201ENST00000563485 527 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 AC022432.1-201ENST00000595739 310 ntBASIC0.36□□□□□ -2.35
SPTSSAQ969W0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.36□□□□□ -2.35
SPTSSAQ969W0 RNU6-353P-201ENST00000364266 108 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 RNU6-343P-201ENST00000364709 104 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 RPL21P1-201ENST00000399532 476 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 CBX3P9-201ENST00000402326 552 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 TPMTP2-201ENST00000414372 726 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 EBAG9P1-201ENST00000418955 543 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTSSAQ969W0 VN1R42P-201ENST00000424651 344 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTSSAQ969W0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.35□□□□□ -2.35
SPTSSAQ969W0 TPRKBP1-201ENST00000456243 481 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 RPL37P6-201ENST00000460682 294 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 AC104629.1-201ENST00000494226 508 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 AC097473.1-201ENST00000508142 408 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.35□□□□□ -2.35
SPTSSAQ969W0 AC093809.1-201ENST00000509155 340 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
SPTSSAQ969W0 RNU4-54P-201ENST00000516428 129 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 RNA5SP168-201ENST00000516642 112 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTSSAQ969W0 AC136618.2-201ENST00000575091 400 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.35□□□□□ -2.35
SPTSSAQ969W0 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.35□□□□□ -2.35
SPTSSAQ969W0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
SPTSSAQ969W0 Y_RNA.40-201ENST00000362645 93 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 RNA5SP361-201ENST00000362686 118 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 RNU6-288P-201ENST00000363690 104 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 Y_RNA.224-201ENST00000364308 111 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 RNU6-432P-201ENST00000384196 109 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 RPS3AP1-201ENST00000413190 320 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 MTCO2P25-201ENST00000447065 681 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 RNU1-131P-201ENST00000458943 161 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 RNU6-165P-201ENST00000517170 99 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 RNU6-1261P-201ENST00000517194 104 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AC009902.1-201ENST00000519351 183 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 BNIP3P16-201ENST00000589779 534 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AL512605.2-201ENST00000592972 256 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AL078603.1-201ENST00000603824 313 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AC090578.1-201ENST00000604955 591 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
SPTSSAQ969W0 AC099654.9-201ENST00000637055 678 ntBASIC0.34□□□□□ -2.36
SPTSSAQ969W0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.33□□□□□ -2.36
SPTSSAQ969W0 RNU6-1210P-201ENST00000363775 107 ntBASIC0.33□□□□□ -2.36
SPTSSAQ969W0 MIR10B-201ENST00000385011 110 ntBASIC0.33□□□□□ -2.36
SPTSSAQ969W0 MIR29B2-201ENST00000385055 81 ntBASIC0.33□□□□□ -2.36
SPTSSAQ969W0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.33□□□□□ -2.36
SPTSSAQ969W0 AC098934.3-201ENST00000430450 190 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms