Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR3199-2-201ENST00000636243 86 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 ADAM3A-203ENST00000461344 2157 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-750P-201ENST00000390946 107 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 FO393413.1-201ENST00000402892 195 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 MTND3P8-201ENST00000412909 339 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 EEF1A1P41-201ENST00000414667 207 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AL139132.1-201ENST00000431587 344 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AL359672.1-201ENST00000442302 409 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC009296.1-201ENST00000443146 155 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC006026.2-201ENST00000457376 180 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 HMGN1P12-201ENST00000499125 195 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-323P-201ENST00000521915 107 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC100830.2-201ENST00000581636 240 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC005730.3-201ENST00000583067 366 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 UBE2V2P2-201ENST00000587677 504 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC020895.1-201ENST00000595362 272 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC123912.5-201ENST00000605470 343 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AL357078.3-201ENST00000607528 618 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC010378.1-201ENST00000619270 362 ntBASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC44A1Q8WWI5 AC009487.2-201ENST00000420969 6821 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-942P-201ENST00000363002 107 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 Y_RNA.135-201ENST00000363439 95 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 SNORA32.2-201ENST00000384049 122 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-1013P-201ENST00000384180 107 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 MIR450B-201ENST00000401182 78 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 SNORD56-201ENST00000413522 71 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 VN1R36P-201ENST00000414936 291 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 SNORA59A-201ENST00000459326 152 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC097462.2-201ENST00000504623 481 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 RNU4-49P-201ENST00000516080 140 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-256P-201ENST00000516747 97 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 Y_RNA.702-201ENST00000516843 96 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC109479.2-201ENST00000517842 174 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC243972.3-201ENST00000539655 198 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 MIR4742-201ENST00000581069 85 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 MIR4635-201ENST00000583759 79 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC023043.2-201ENST00000589678 1026 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 RPL23AP78-201ENST00000599928 470 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AL356575.1-201ENST00000603008 283 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AC008121.1-201ENST00000603244 268 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-85P-201ENST00000605989 107 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 AL355073.2-201ENST00000612106 557 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 UCA1.1-201ENST00000620952 75 ntBASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A1Q8WWI5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 MAPK10-266ENST00000641066 6555 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 RNA5SP210-201ENST00000391034 120 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 SNORA11.2-201ENST00000408318 127 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 Y_RNA.604-201ENST00000410574 102 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AL161651.1-201ENST00000440882 223 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 snoU109.2-201ENST00000459316 135 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 RPL7P43-201ENST00000478876 753 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AC116655.1-201ENST00000508324 901 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AP005597.4-201ENST00000526762 229 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AL121821.2-201ENST00000556081 394 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 MIR3942-201ENST00000585264 109 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 OR1M4P-201ENST00000589199 287 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 AL138726.1-201ENST00000614873 333 ntBASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC44A1Q8WWI5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.66□□□□□ -1.98
SLC44A1Q8WWI5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SLC44A1Q8WWI5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SLC44A1Q8WWI5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SLC44A1Q8WWI5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.66□□□□□ -1.98
SLC44A1Q8WWI5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms