Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 OSBPL9P5-201ENST00000542581 171 ntBASIC1.59□□□□□ -2.15
LINC01560Q8TB33 RPS3AP23-202ENST00000574601 686 ntBASIC1.59□□□□□ -2.15
LINC01560Q8TB33 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LINC01560Q8TB33 AC073539.2-201ENST00000597113 165 ntBASIC1.59□□□□□ -2.15
LINC01560Q8TB33 VN1R80P-201ENST00000597126 338 ntBASIC1.59□□□□□ -2.15
LINC01560Q8TB33 AC121247.2-201ENST00000604776 136 ntBASIC1.59□□□□□ -2.15
LINC01560Q8TB33 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.59□□□□□ -2.15
LINC01560Q8TB33 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.59□□□□□ -2.15
LINC01560Q8TB33 AC011155.2-201ENST00000623202 216 ntBASIC1.59□□□□□ -2.15
LINC01560Q8TB33 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01560Q8TB33 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01560Q8TB33 MTND5P17-201ENST00000418405 1603 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 Z82209.1-201ENST00000422141 2135 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC138393.1-203ENST00000327086 343 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 Y_RNA.201-201ENST00000364052 96 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 RNU6-116P-201ENST00000384042 109 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 SNORD116-8-201ENST00000384365 95 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 RNU6-843P-201ENST00000384454 104 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 MIR1302-8-201ENST00000408342 128 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 RN7SKP142-201ENST00000411236 328 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 RNU6-387P-201ENST00000411331 105 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 OR6C66P-201ENST00000414917 930 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 C1DP2-201ENST00000418167 426 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC244505.5-201ENST00000443639 207 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC079448.1-201ENST00000449377 373 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AL162395.1-201ENST00000457882 422 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 HMGB1P30-201ENST00000492455 606 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 MTND3P25-201ENST00000509243 135 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC091965.2-201ENST00000512324 613 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC117532.1-201ENST00000514638 323 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 SNORD27.1-201ENST00000516319 72 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC026407.1-201ENST00000518369 204 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC136619.2-201ENST00000563361 631 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 MIR4498-201ENST00000577599 66 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 BNIP3P30-201ENST00000601184 574 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AL713866.2-201ENST00000603579 219 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC093788.1-201ENST00000609356 927 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC073114.1-201ENST00000612027 490 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AP001486.3-201ENST00000615334 372 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 AC245884.12-201ENST00000615364 59 ntBASIC1.58□□□□□ -2.16
LINC01560Q8TB33 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
LINC01560Q8TB33 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 MIR378A-201ENST00000362177 66 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 RNU6-108P-201ENST00000365558 107 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 RNU1-148P-201ENST00000384472 162 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 SNORD116-20-201ENST00000384529 92 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 RNU6-550P-201ENST00000391057 101 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 RNA5SP247-201ENST00000411181 105 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC008267.5-201ENST00000424928 265 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC079781.2-201ENST00000446424 169 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AL139109.1-201ENST00000455491 297 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AP001025.1-201ENST00000486139 332 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 RNU6-250P-201ENST00000516958 103 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 CR383656.8-201ENST00000549046 145 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC008088.1-201ENST00000580993 280 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 MIR4775-201ENST00000581168 75 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC245014.2-201ENST00000603689 287 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 Z84480.1-201ENST00000605131 311 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC246785.4-201ENST00000605374 287 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC021646.1-201ENST00000605469 484 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 AC098614.4-201ENST00000607601 462 ntBASIC1.57□□□□□ -2.16
LINC01560Q8TB33 RNU6-181P-201ENST00000363225 107 ntBASIC1.56□□□□□ -2.16
LINC01560Q8TB33 RNU6-1097P-201ENST00000363586 107 ntBASIC1.56□□□□□ -2.16
LINC01560Q8TB33 RNU6-1032P-201ENST00000384100 107 ntBASIC1.56□□□□□ -2.16
LINC01560Q8TB33 RNU6-622P-201ENST00000384272 103 ntBASIC1.56□□□□□ -2.16
LINC01560Q8TB33 MIR454-201ENST00000390180 115 ntBASIC1.56□□□□□ -2.16
LINC01560Q8TB33 MIR1294-201ENST00000408503 142 ntBASIC1.56□□□□□ -2.16
LINC01560Q8TB33 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms