Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MTND1P32-201ENST00000433043 938 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 CALM1P1-201ENST00000442082 433 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 USP9YP17-201ENST00000444617 696 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 USP9YP25-201ENST00000457708 443 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 AC098862.1-201ENST00000504991 413 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 AC025465.3-201ENST00000510570 311 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 AC112206.3-201ENST00000514578 389 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 AC006338.1-201ENST00000618453 749 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 AL159153.1-201ENST00000619688 317 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 SCARNA4-202ENST00000625402 129 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 AC233981.2-201ENST00000611524 1614 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 AL445523.1-201ENST00000451184 1362 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 MTND4P16-201ENST00000466108 1367 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 ZNF29P-201ENST00000225587 168 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 SNORD3E-201ENST00000362899 217 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 Y_RNA.97-201ENST00000363094 102 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 RNU6-944P-201ENST00000364023 107 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 RNY4P16-201ENST00000364768 94 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 Y_RNA.302-201ENST00000364997 102 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 RNU6-439P-201ENST00000384188 106 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 MIR29B2-201ENST00000385055 81 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 RNU6-174P-201ENST00000410406 106 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 VN1R108P-201ENST00000431580 830 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 RPL23AP30-201ENST00000432419 501 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 MIR3118-1-201ENST00000581787 76 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 BNIP3P40-201ENST00000596017 556 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AL158050.2-201ENST00000605336 568 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AC123912.5-201ENST00000605470 343 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AP002360.4-201ENST00000606980 481 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AL157392.4-201ENST00000609756 345 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AL359547.2-201ENST00000615810 418 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AC009269.6-201ENST00000621778 588 ntBASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.36□□□□□ -2.19
CLHC1Q8NHS4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 RNU1-62P-201ENST00000362599 164 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AC099513.1-201ENST00000490423 301 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 RNU6-991P-201ENST00000516168 107 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AC022616.6-201ENST00000520479 119 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 COPS8P3-201ENST00000526024 482 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AP001004.1-201ENST00000582468 324 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AL353778.1-201ENST00000603149 408 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AC121334.2-201ENST00000605387 271 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 AC103706.2-201ENST00000638080 240 ntBASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLHC1Q8NHS4 OR4G2P-201ENST00000328113 903 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 RNU6-83P-201ENST00000384568 112 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 MIR10A-201ENST00000385043 110 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 SNORA67.5-201ENST00000391036 107 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AL031779.1-201ENST00000415663 330 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AL353752.1-201ENST00000454946 260 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 snoU109.2-201ENST00000459316 135 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 HSPE1P23-201ENST00000509838 286 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AC002400.1-201ENST00000569310 726 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 MIR4509-3-201ENST00000578671 94 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 MIR4509-2-201ENST00000583920 94 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AP000942.3-201ENST00000603702 160 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AL139418.1-201ENST00000613613 177 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 MIR4509-1-201ENST00000618224 94 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 AC006927.4-201ENST00000639187 543 ntBASIC1.34□□□□□ -2.19
CLHC1Q8NHS4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 SNORD116-20-201ENST00000384529 92 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 SNORD115.1-201ENST00000391109 76 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AL355143.1-201ENST00000407101 841 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms