Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL356094.1-201ENST00000624663 1212 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 LINC02555-201ENST00000563933 1951 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-236P-201ENST00000363886 106 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 snoZ40.1-201ENST00000364540 72 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-546P-201ENST00000383991 107 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-360P-201ENST00000390944 104 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 SNX2P2-201ENST00000424553 323 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MTCYBP32-201ENST00000427945 1084 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC020550.1-201ENST00000447385 163 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 PTP4A1P4-201ENST00000512479 322 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC023932.2-201ENST00000603176 175 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MIR924-201ENST00000638017 53 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AP000648.3-201ENST00000623539 4507 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU1-124P-201ENST00000363861 145 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 U3.13-201ENST00000364804 214 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-395P-201ENST00000365662 106 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-950P-201ENST00000384651 107 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 TIMM9P2-201ENST00000419324 266 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 USP9YP21-201ENST00000420603 432 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL161788.1-201ENST00000441805 169 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC108729.1-201ENST00000487812 947 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 CYP4A27P-201ENST00000567218 190 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.757-201ENST00000578934 114 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC005261.5-201ENST00000596280 355 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC073410.2-201ENST00000603240 332 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 CYP2C61P-201ENST00000604072 290 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU5E-8P-201ENST00000363502 116 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-1305P-201ENST00000364353 104 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RPL31P54-201ENST00000429803 370 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 KLF3P2-201ENST00000465138 268 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNA5SP67-201ENST00000516422 131 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 BNIP3P9-201ENST00000603714 553 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AP001485.1-201ENST00000604799 199 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 SNORA72.2-201ENST00000365028 127 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MIR1285-1-201ENST00000408593 84 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-1245P-201ENST00000411130 106 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MTCYBP42-201ENST00000444653 1130 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU5F-2P-201ENST00000516066 82 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-1092P-201ENST00000516955 87 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC034114.1-201ENST00000520293 285 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MIR4782-201ENST00000577987 79 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC090330.1-201ENST00000588646 764 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL136363.2-201ENST00000604173 851 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC093788.1-201ENST00000609356 927 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU5B-4P-201ENST00000363508 111 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 SNORA40.19-201ENST00000390846 128 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU11-5P-201ENST00000391216 129 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNA5SP25-201ENST00000410815 110 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC010376.1-201ENST00000522101 334 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL136520.1-202ENST00000555494 763 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC005668.1-201ENST00000571142 476 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MIR4637-201ENST00000582405 84 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MTATP6P2-201ENST00000603319 678 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 HSPE1P19-201ENST00000603327 295 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC010900.2-201ENST00000604508 210 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC103810.9-201ENST00000606688 112 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC091948.2-201ENST00000636510 279 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 Z99571.1-201ENST00000636677 394 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU5E-6P-201ENST00000365574 115 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RPL21P24-201ENST00000413752 448 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC025465.3-201ENST00000510570 311 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 SCARNA3-201ENST00000517097 143 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 SNORA31.22-201ENST00000517204 135 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC011451.2-201ENST00000604303 598 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC112220.3-201ENST00000605502 502 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 NDUFA8P1-201ENST00000605525 367 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC023158.2-201ENST00000614876 543 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.99-201ENST00000363138 105 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms