Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 WISP1-OT1-201ENST00000602893 642 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 RNU6-944P-201ENST00000364023 107 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 RNU6-83P-201ENST00000384568 112 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 MIR30A-201ENST00000385092 71 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 MIR620-201ENST00000385232 95 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 RPL22P18-201ENST00000417197 377 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 AC007098.1-201ENST00000420122 367 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 SNRPGP13-201ENST00000442212 177 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 AC112492.4-201ENST00000456549 352 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 AC112204.1-201ENST00000502591 103 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 RNU6-237P-201ENST00000515985 71 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 RNU6-991P-201ENST00000516168 107 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 Y_RNA.687-201ENST00000516558 91 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 RNU6-965P-201ENST00000516721 96 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 MTND4LP18-201ENST00000526864 291 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 MIR3118-1-201ENST00000581787 76 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 AL139418.1-201ENST00000613613 177 ntBASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
ZIC4Q8N9L1 CBX3P1-201ENST00000325243 554 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 MIR126-201ENST00000362291 85 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 Y_RNA.97-201ENST00000363094 102 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 SNORD56.2-201ENST00000363242 71 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 RNU6-743P-201ENST00000364151 106 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 RNU6-1179P-201ENST00000384667 107 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 RPS3AP36-201ENST00000398190 775 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AL590556.1-201ENST00000423231 483 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 CBX3P6-201ENST00000430257 527 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 HMGB1P31-201ENST00000437242 427 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 HMGB1P18-201ENST00000438801 619 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 GDI2P2-201ENST00000445131 608 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 RNU1-98P-201ENST00000458992 160 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AP000797.1-201ENST00000478870 387 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 FO393415.2-201ENST00000480085 343 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 FAM206BP-201ENST00000510179 541 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 SNORA43.2-201ENST00000516652 128 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 DEFB131E-202ENST00000602581 683 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AP000942.3-201ENST00000603702 160 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AL031281.1-201ENST00000604049 488 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AL139286.2-201ENST00000606838 396 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AC012409.4-201ENST00000612923 249 ntBASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.24□□□□□ -2.21
ZIC4Q8N9L1 ZNF209P-201ENST00000593450 2304 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 snoU2_19.1-201ENST00000362361 80 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 RAP1BP3-201ENST00000407180 549 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 MTCYBP5-201ENST00000423752 1135 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AC119618.1-201ENST00000434191 222 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AC118469.1-201ENST00000442943 488 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AL357134.1-201ENST00000445848 426 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AL353752.1-201ENST00000454946 260 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 RNU7-95P-201ENST00000459222 64 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 MTCYBP40-201ENST00000509390 1135 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 RNA5SP337-201ENST00000517007 109 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AL161670.1-201ENST00000554348 137 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 MTND4P33-201ENST00000556706 766 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AC137800.2-201ENST00000574375 120 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 AL031667.3-201ENST00000620124 655 ntBASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
ZIC4Q8N9L1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.22□□□□□ -2.21
ZIC4Q8N9L1 WWP1P1-201ENST00000466609 2769 ntBASIC1.22□□□□□ -2.21
ZIC4Q8N9L1 ZNF29P-201ENST00000225587 168 ntBASIC1.22□□□□□ -2.21
ZIC4Q8N9L1 SNORD56.1-201ENST00000362913 68 ntBASIC1.22□□□□□ -2.21
ZIC4Q8N9L1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
ZIC4Q8N9L1 SNORA48.1-201ENST00000390879 135 ntBASIC1.22□□□□□ -2.21
ZIC4Q8N9L1 CISD1P1-201ENST00000393907 327 ntBASIC1.22□□□□□ -2.21
ZIC4Q8N9L1 Y_RNA.597-201ENST00000410463 100 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms