Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC008536.2-201ENST00000607284 349 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AC096772.1-201ENST00000609146 564 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 U6.42-201ENST00000618440 107 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 MIR5739-201ENST00000619803 80 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 FER-210ENST00000628534 558 ntTSL 5 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 CKAP2P1-201ENST00000555477 2049 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 ZNF271P-202ENST00000465539 1970 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 OR56A5-201ENST00000340110 738 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 MIR21-201ENST00000362134 72 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 MIR412-201ENST00000362142 91 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 SNORD114-30-201ENST00000364448 72 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.248-201ENST00000364501 109 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.255-201ENST00000364581 97 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 RNU6-534P-201ENST00000364877 106 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 RNU6-996P-201ENST00000365438 107 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.381-201ENST00000365666 102 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 SNORA69-201ENST00000383895 132 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AL133475.1-201ENST00000404414 305 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 BTF3P7-201ENST00000407097 488 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 RN7SKP158-201ENST00000410453 326 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 MTCO1P20-201ENST00000425366 358 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 MYL8P-204ENST00000431574 518 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AL596276.1-201ENST00000434465 418 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AL118520.1-201ENST00000450770 291 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC011753.1-201ENST00000451001 220 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AL163973.1-201ENST00000484753 577 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 MRPL42P6-201ENST00000486397 371 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 RNU6-1281P-201ENST00000516223 105 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 RNA5SP24-201ENST00000516478 95 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 RNU5B-3P-201ENST00000516601 115 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 RNU6-1178P-201ENST00000516674 107 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC079598.5-201ENST00000547460 117 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC092325.1-201ENST00000566449 554 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AL138963.2-201ENST00000605137 226 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC104458.1-201ENST00000608243 463 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC046143.2-201ENST00000609789 160 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC011890.2-201ENST00000613393 294 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
RTL3Q8N8U3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 MIR449A-201ENST00000362113 91 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RNU6-451P-201ENST00000362921 107 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.89-201ENST00000363031 102 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RNY3P3-201ENST00000363816 102 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RNA5SP240-201ENST00000365355 128 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RNU6-903P-201ENST00000391270 109 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AL591416.1-201ENST00000404015 867 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RNU2-29P-201ENST00000410423 189 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.623-201ENST00000411128 95 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 USP9YP27-201ENST00000418455 438 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 SNRPEP10-201ENST00000420249 274 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AC124916.1-201ENST00000444020 547 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 CYP2C59P-201ENST00000457790 269 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AL162395.1-201ENST00000457882 422 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RPS29P15-201ENST00000458329 171 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 SNORA59A-201ENST00000459326 152 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 MTCO3P38-201ENST00000468910 766 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RBBP4P6-201ENST00000508098 202 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RNU6-123P-201ENST00000516163 102 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 RNA5SP503-201ENST00000517047 117 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 CBX3P7-201ENST00000532876 502 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AL138976.2-201ENST00000563989 694 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 MIR4801-201ENST00000582704 82 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 MIR548AC-201ENST00000585049 88 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 MIR4424-201ENST00000585257 86 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 AL354950.2-201ENST00000617939 290 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 U4atac.1-201ENST00000618345 95 ntBASIC2.42□□□□□ -2.02
RTL3Q8N8U3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RTL3Q8N8U3 HSPA8P4-201ENST00000511877 1920 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms