Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SNRPEP8-201ENST00000442866 260 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 NIPA2P5-201ENST00000452282 464 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 Y_RNA.691-201ENST00000516611 103 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 SNORA31.21-201ENST00000517180 77 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 RNU6-323P-201ENST00000521915 107 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AC100830.2-201ENST00000581636 240 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AC013412.1-201ENST00000610687 192 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AC063943.3-201ENST00000615562 356 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 AL133216.2-202ENST00000634512 349 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 MAPK10-266ENST00000641066 6555 ntBASIC3.07□□□□□ -1.92
VPS52Q8N1B4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 RNU6-1252P-201ENST00000363054 104 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 Y_RNA.142-201ENST00000363491 102 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 RNU6-128P-201ENST00000383976 107 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 U3.37-201ENST00000408528 213 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 RNU2-52P-201ENST00000410680 190 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 RN7SKP284-201ENST00000411002 343 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AC016831.2-201ENST00000417179 352 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 PGBD4P6-201ENST00000421501 610 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 MTND4LP16-201ENST00000440828 295 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 RPL32P28-201ENST00000443577 397 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 MRPL50P4-201ENST00000446432 475 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 MTND1P11-201ENST00000456661 876 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AL031183.1-201ENST00000457667 207 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 SNORD109B-201ENST00000458961 67 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 SNORD109A-201ENST00000459128 67 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 FGF7P4-201ENST00000509595 295 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 RNU6-1088P-201ENST00000516850 104 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AC026241.1-201ENST00000517873 2142 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AP005597.4-201ENST00000526762 229 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AP000787.2-201ENST00000604432 568 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AC123912.5-201ENST00000605470 343 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 RMST_7.1-201ENST00000621935 268 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 SCARNA4-202ENST00000625402 129 ntBASIC3.06□□□□□ -1.92
VPS52Q8N1B4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS52Q8N1B4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 Y_RNA.184-201ENST00000363884 108 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 MIR196B-201ENST00000384852 84 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AL445529.1-201ENST00000398713 389 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 SNORD88.1-201ENST00000408684 91 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AC023141.4-201ENST00000412031 328 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 NCOR1P3-201ENST00000420479 303 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 PPP1R2P5-201ENST00000457256 603 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 MTCO1P29-201ENST00000496868 288 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AC103851.1-201ENST00000506833 274 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 COPS8P3-201ENST00000526024 482 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AC021739.1-201ENST00000559631 174 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 FGF7P1-201ENST00000582820 288 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AL117336.2-201ENST00000602435 335 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 RNU6-85P-201ENST00000605989 107 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AC069234.5-201ENST00000611056 416 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 Y_RNA.804-201ENST00000615262 101 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 AC099654.5-201ENST00000636479 350 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 TPTEP1-208ENST00000636884 213 ntBASIC3.05□□□□□ -1.92
VPS52Q8N1B4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
VPS52Q8N1B4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC138393.1-203ENST00000327086 343 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 RNU6-898P-201ENST00000365627 104 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 SNORD116-11-201ENST00000383882 92 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 RNU1-109P-201ENST00000383960 147 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AL360182.1-201ENST00000397433 468 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 FO393413.1-201ENST00000402892 195 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.04□□□□□ -1.92
VPS52Q8N1B4 SNORD56-201ENST00000413522 71 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS52Q8N1B4 RPL7P37-201ENST00000425095 738 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms