Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL021997.1-201ENST00000605757 193 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AP001330.5-201ENST00000607176 411 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-91P-201ENST00000607774 107 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC013412.1-201ENST00000610687 192 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AC068792.1-201ENST00000621354 417 ntBASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
C9orf40Q8IXQ3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AL354685.2-201ENST00000448218 1447 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 Y_RNA.255-201ENST00000364581 97 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 SNORD116-20-201ENST00000384529 92 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-220P-201ENST00000390919 107 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 BX276092.3-201ENST00000424182 230 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 RPL30P4-201ENST00000429309 333 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AL589823.1-201ENST00000429577 183 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AL139415.2-201ENST00000431968 163 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 HMGB1P31-201ENST00000437242 427 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 RPL7P54-201ENST00000438336 674 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 RPL32P28-201ENST00000443577 397 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 PRPS1P1-201ENST00000445305 876 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 FDX1P2-201ENST00000450769 375 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AC112771.1-201ENST00000463581 102 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 TRBV12-1-201ENST00000479785 344 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 RNU2-69P-201ENST00000516061 100 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 SNORA40.12-201ENST00000516329 111 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AP001893.2-201ENST00000526949 202 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AL137161.1-201ENST00000532231 390 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 CR383656.8-201ENST00000549046 145 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 MIR1273D-201ENST00000577266 86 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 BNIP3P30-201ENST00000601184 574 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 HULC.1-201ENST00000612720 240 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AL359880.1-201ENST00000621879 266 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AC022418.1-201ENST00000624118 445 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 MIR3529-201ENST00000637713 78 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 Z75746.1-201ENST00000440243 2080 ntBASIC2.03□□□□□ -2.08
C9orf40Q8IXQ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
C9orf40Q8IXQ3 AC135776.4-201ENST00000624300 1904 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-1085P-201ENST00000363576 107 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-1322P-201ENST00000364309 107 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 Y_RNA.324-201ENST00000365165 102 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 Y_RNA.481-201ENST00000384373 102 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 SNORA11.2-201ENST00000408318 127 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 UBE2V1P10-201ENST00000414685 269 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC097463.2-201ENST00000421074 142 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AL365400.1-201ENST00000431854 640 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC016691.1-201ENST00000441321 413 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 MTND1P1-201ENST00000445453 368 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 RNU7-180P-201ENST00000459240 63 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 RPL7P43-201ENST00000478876 753 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 SNORA43.2-201ENST00000516652 128 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC104383.1-201ENST00000530297 370 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC121758.2-201ENST00000553271 193 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 MIR5583-1-201ENST00000580941 59 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC069294.1-201ENST00000608397 350 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 AC015540.1-201ENST00000615828 501 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 RMST_7.1-201ENST00000621935 268 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
C9orf40Q8IXQ3 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 Y_RNA.480-201ENST00000384364 102 ntBASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 RNU6-843P-201ENST00000384454 104 ntBASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 CALM2P3-201ENST00000400429 449 ntBASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 AL606923.1-201ENST00000406616 190 ntBASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 U6atac.2-201ENST00000408644 118 ntBASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.01□□□□□ -2.09
C9orf40Q8IXQ3 AC096638.1-201ENST00000444678 216 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms