Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-952P-201ENST00000391164 108 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 RPL21P24-201ENST00000413752 448 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 BX119904.4-201ENST00000424402 301 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 FTH1P12-201ENST00000432137 551 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 MTCYBP15-201ENST00000433123 1127 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 ZFAND6P1-201ENST00000434138 605 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 CR769776.1-201ENST00000441254 787 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
USP54Q70EL1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.72□□□□□ -2.29
USP54Q70EL1 AC010631.1-201ENST00000474150 156 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 UBL5P1-201ENST00000507979 193 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.72□□□□□ -2.29
USP54Q70EL1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.72□□□□□ -2.29
USP54Q70EL1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.72□□□□□ -2.29
USP54Q70EL1 CYP4A27P-201ENST00000567218 190 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.72□□□□□ -2.29
USP54Q70EL1 TUG1_2.1-201ENST00000614234 87 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 uc_338.15-201ENST00000615470 191 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 MIR6134-201ENST00000617606 109 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.72□□□□□ -2.29
USP54Q70EL1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
USP54Q70EL1 RNU6-97P-201ENST00000363387 104 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 RNU6-1164P-201ENST00000364428 107 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 RNU6-898P-201ENST00000365627 104 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 FTH1P15-201ENST00000406984 280 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.71□□□□□ -2.3
USP54Q70EL1 AC008267.5-201ENST00000424928 265 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.71□□□□□ -2.3
USP54Q70EL1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.71□□□□□ -2.3
USP54Q70EL1 BTF3P15-201ENST00000455606 336 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.71□□□□□ -2.3
USP54Q70EL1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.71□□□□□ -2.3
USP54Q70EL1 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.71□□□□□ -2.3
USP54Q70EL1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
USP54Q70EL1 AC023194.1-201ENST00000493084 308 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 LRRC34P2-201ENST00000514850 553 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 RNU6-572P-201ENST00000516724 80 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.71□□□□□ -2.3
USP54Q70EL1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.71□□□□□ -2.3
USP54Q70EL1 SNORA77B-201ENST00000578179 125 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.71□□□□□ -2.3
USP54Q70EL1 AL353997.4-201ENST00000586196 166 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 BNIP3P9-201ENST00000603714 553 ntBASIC0.71□□□□□ -2.3
USP54Q70EL1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.71□□□□□ -2.3
USP54Q70EL1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.71□□□□□ -2.3
USP54Q70EL1 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.71□□□□□ -2.3
USP54Q70EL1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
USP54Q70EL1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.7□□□□□ -2.3
USP54Q70EL1 RNU6-968P-201ENST00000384076 107 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 RNU6-160P-201ENST00000384591 107 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 AL158050.1-201ENST00000416077 457 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 RPS27P16-201ENST00000425758 201 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 SEPT7P5-201ENST00000434048 306 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 AC114878.1-201ENST00000441166 358 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 MTCO1P44-201ENST00000441935 243 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 ELOCP30-201ENST00000447108 299 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 FABP5P15-201ENST00000453566 214 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 RPF2P2-201ENST00000504693 896 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.7□□□□□ -2.3
USP54Q70EL1 MTCYBP43-201ENST00000513621 740 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 RNU2-53P-201ENST00000516257 147 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 RNA5SP395-201ENST00000516567 118 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 AC136619.2-201ENST00000563361 631 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.7□□□□□ -2.3
USP54Q70EL1 AP001981.2-201ENST00000603241 418 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 AC120349.2-201ENST00000625002 298 ntBASIC0.7□□□□□ -2.3
USP54Q70EL1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.7□□□□□ -2.3
USP54Q70EL1 FARSBP1-201ENST00000435808 1778 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 DHFRP6-201ENST00000401776 268 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.69□□□□□ -2.3
USP54Q70EL1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.69□□□□□ -2.3
USP54Q70EL1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.69□□□□□ -2.3
USP54Q70EL1 AC108729.2-201ENST00000476543 840 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.69□□□□□ -2.3
USP54Q70EL1 NIFKP6-201ENST00000598115 845 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AL583856.2-201ENST00000606298 543 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.69□□□□□ -2.3
USP54Q70EL1 AP000676.3-201ENST00000623299 569 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
USP54Q70EL1 RNA5SP493-201ENST00000364115 91 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 SNORD114-6-201ENST00000364393 72 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 RNA5SP127-201ENST00000411051 133 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.69□□□□□ -2.3
USP54Q70EL1 RPL7P55-201ENST00000450522 746 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 RNA5SP269-201ENST00000459032 137 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AC087477.1-201ENST00000465747 340 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AC114981.1-201ENST00000503897 678 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 MTCYBP40-201ENST00000509390 1135 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.69□□□□□ -2.3
USP54Q70EL1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.69□□□□□ -2.3
USP54Q70EL1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.69□□□□□ -2.3
USP54Q70EL1 AC126365.2-201ENST00000580630 379 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 OR4H6P-202ENST00000603819 340 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AL161798.1-201ENST00000604630 131 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AC008759.3-201ENST00000613300 508 ntBASIC0.69□□□□□ -2.3
USP54Q70EL1 AC107982.1-201ENST00000507171 1300 ntBASIC0.68□□□□□ -2.3
USP54Q70EL1 MIR16-2-201ENST00000362117 81 ntBASIC0.68□□□□□ -2.3
USP54Q70EL1 Y_RNA.255-201ENST00000364581 97 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms