Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 RNU1-75P-201ENST00000347264 129 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RNU1-140P-201ENST00000365040 165 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RNU6-827P-201ENST00000365553 106 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 SNORA7.4-201ENST00000384249 137 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.496-201ENST00000384444 101 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RNU6-174P-201ENST00000410406 106 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RN7SL863P-201ENST00000462370 296 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RNU6-1137P-201ENST00000517073 99 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RNU6-699P-201ENST00000517081 110 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RNU6-988P-201ENST00000519081 107 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 H3F3AP1-201ENST00000559984 334 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 AC109446.1-201ENST00000566172 220 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 MIR3976-201ENST00000606807 139 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 uc_338.1-201ENST00000612113 180 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 AL161629.2-201ENST00000615347 275 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 U6.99-201ENST00000637524 83 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 MTND4P1-201ENST00000457501 1466 ntBASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC007496.3-201ENST00000624987 3443 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 RNU6-778P-201ENST00000363269 103 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.252-201ENST00000364556 101 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 RNU6-1317P-201ENST00000364582 104 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 RNU6-790P-201ENST00000384479 105 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AL138885.1-201ENST00000405921 675 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC113618.1-201ENST00000416747 285 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 MCFD2P1-201ENST00000417812 300 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AL117339.3-201ENST00000418733 162 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 BX276092.3-201ENST00000424182 230 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AL160004.2-201ENST00000432935 350 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 RNU6-1037P-201ENST00000459571 107 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC010401.1-201ENST00000463867 348 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC008571.1-201ENST00000467232 300 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC021205.2-201ENST00000480069 347 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 RPS4XP22-201ENST00000480755 780 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC022493.2-201ENST00000506122 481 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 RNU1-103P-201ENST00000516502 125 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.687-201ENST00000516558 91 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 RNU6-1183P-201ENST00000517054 60 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC093331.1-201ENST00000521474 169 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AP002404.1-201ENST00000532005 451 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC011602.1-201ENST00000546484 331 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC103996.1-201ENST00000555468 102 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC008121.1-201ENST00000603244 268 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AL162713.1-201ENST00000604480 262 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC007485.1-201ENST00000616755 206 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 MIR622-201ENST00000638396 96 ntBASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf139Q6ZV77 AC091564.4-201ENST00000533934 2194 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 RPL9P7-201ENST00000330965 580 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 MIR30E-201ENST00000362104 92 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 MIR422A-201ENST00000362286 90 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 RNU6-428P-201ENST00000362942 107 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 RNU6-799P-201ENST00000363567 107 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 RNA5SP139-201ENST00000364340 117 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AP002088.1-201ENST00000382740 395 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 RNU6-639P-201ENST00000384074 107 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 MIR34A-201ENST00000385130 110 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 SAR1AP2-201ENST00000392696 594 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 RNA5SP229-201ENST00000410809 99 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AL513043.1-201ENST00000439124 535 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 HIGD1AP2-201ENST00000446367 280 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AC013470.1-201ENST00000453438 462 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 RPL9P9-202ENST00000466501 579 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AC006483.1-201ENST00000487308 313 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms