Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 PTP4A1P4-201ENST00000512479 322 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AC018659.1-201ENST00000551083 169 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AC040896.1-201ENST00000613819 479 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 RNU6-140P-201ENST00000384566 108 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 MIR224-201ENST00000384889 81 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 MIR218-1-201ENST00000384999 110 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 SNORA40C-201ENST00000391285 128 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AL121978.1-201ENST00000402778 359 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 RNU2-33P-201ENST00000410344 192 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 NCOR1P3-201ENST00000420479 303 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 EIF1P1-201ENST00000421436 341 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AL589872.1-201ENST00000426602 288 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC099677.2-201ENST00000436385 175 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 MTND1P33-201ENST00000446251 917 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 ACA64.5-201ENST00000516207 127 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AL671309.1-201ENST00000603750 544 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC024257.5-201ENST00000612739 531 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC138627.2-201ENST00000624202 601 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC119751.3-201ENST00000399720 670 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 SNORD99-201ENST00000408612 74 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC010385.1-201ENST00000412374 256 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC027119.1-201ENST00000440877 241 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 RNU6-965P-201ENST00000516721 96 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC004987.4-201ENST00000603383 338 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC092354.1-201ENST00000606057 376 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AL158163.2-201ENST00000619110 700 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC009269.6-201ENST00000621778 588 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AL590396.2-201ENST00000636511 1041 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 AC017104.5-201ENST00000637647 639 ntBASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.13□□□□□ -2.39
CSPG4Q6UVK1 RNA5SP493-201ENST00000364115 91 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 RNA5SP118-201ENST00000410385 109 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC114482.1-201ENST00000418010 247 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC138623.1-201ENST00000418060 216 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AL121578.1-201ENST00000428051 892 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AL512844.2-201ENST00000433990 593 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 COX7A2P2-201ENST00000505291 250 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 RNU6-202P-201ENST00000515998 96 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AL442163.3-201ENST00000554110 156 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC012065.4-201ENST00000602445 679 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC242628.1-201ENST00000606810 391 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AL138713.1-201ENST00000624026 2130 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 MTND4P14-201ENST00000435799 1354 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 RNU6-386P-201ENST00000362650 107 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 RNU6-529P-201ENST00000363383 104 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 RN7SKP142-201ENST00000411236 328 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC007919.1-201ENST00000429380 217 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 HSPE1P9-201ENST00000440046 311 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC069257.2-201ENST00000441819 155 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 FCF1P6-201ENST00000456841 595 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC010460.2-201ENST00000509054 677 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 RN7SKP88-201ENST00000516847 250 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC109329.1-201ENST00000518744 317 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AL136520.1-202ENST00000555494 763 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC136619.2-201ENST00000563361 631 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC091489.2-201ENST00000566263 604 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 SNORA77B-201ENST00000578179 125 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AL357094.1-201ENST00000603845 844 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 AC004805.2-201ENST00000605382 482 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 7SK.8-201ENST00000612110 250 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 uc_338.6-201ENST00000613544 171 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 7SK.11-201ENST00000615477 250 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 7SK.13-201ENST00000622040 250 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 U6.101-201ENST00000637707 76 ntBASIC0.12□□□□□ -2.39
CSPG4Q6UVK1 ENSAP3-201ENST00000312710 333 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 RNU6-654P-201ENST00000364373 107 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms