Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 Y_RNA.383-201ENST00000383855 97 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 MIR3065-201ENST00000390137 79 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 SNORA74C-2-201ENST00000411179 201 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 AC005300.1-201ENST00000428401 373 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 SETP5-201ENST00000437270 562 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 AC005042.3-201ENST00000453230 174 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 RPL21P126-201ENST00000470049 478 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 RPL30P12-201ENST00000474666 353 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 RNU6-861P-201ENST00000516745 106 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 IFITM8P-201ENST00000522529 394 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 RPL23AP97-201ENST00000568955 471 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 MIR3133-201ENST00000583157 78 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 KLKP1-201ENST00000595979 403 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 AC020914.4-201ENST00000597690 277 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 AL356575.1-201ENST00000603008 283 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 AC024220.1-201ENST00000603675 484 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 AC011921.3-201ENST00000605540 361 ntBASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN4Q6PJG9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRFN4Q6PJG9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.9□□□□□ -1.78
LRFN4Q6PJG9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRFN4Q6PJG9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRFN4Q6PJG9 RNA5SP443-201ENST00000363083 132 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 RNU6-245P-201ENST00000384020 107 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 Y_RNA.418-201ENST00000384029 102 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 RNU6-213P-201ENST00000384051 104 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 MIR129-1-201ENST00000384972 72 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 RNA5SP332-201ENST00000391063 115 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 RPL19P1-201ENST00000411635 428 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AC138623.1-201ENST00000418060 216 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AC019205.3-201ENST00000424573 156 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AC007215.1-201ENST00000464893 276 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 MIR2114-201ENST00000516645 80 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 MIR3910-1-201ENST00000580936 111 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AL078605.1-201ENST00000603529 500 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AC079587.1-201ENST00000603846 277 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AC022441.3-201ENST00000605737 136 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AL357075.2-201ENST00000614906 189 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AC004944.1-201ENST00000517807 3059 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 FAM35DP-201ENST00000323387 2712 ntBASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN4Q6PJG9 AC135776.4-201ENST00000624300 1904 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 RNU6-1289P-201ENST00000384431 106 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 MIR192-201ENST00000384915 110 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 MIR1183-201ENST00000408856 89 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 RNA5SP239-201ENST00000410218 129 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 RNU6-651P-201ENST00000411040 105 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AL356387.2-201ENST00000422272 243 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 RPL23AP82-202ENST00000427528 469 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 HLA-N-201ENST00000437516 135 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AL161651.1-201ENST00000440882 223 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 MRPS10P1-201ENST00000448483 130 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 NUTF2P3-201ENST00000448540 384 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 RPL23AP81-201ENST00000455252 467 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 RPS29P33-201ENST00000456717 146 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 HMGN2P16-201ENST00000456802 261 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 SNORD2.1-201ENST00000458762 69 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AC109925.1-201ENST00000478069 331 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AC006499.6-201ENST00000511169 607 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 MIR3136-201ENST00000583498 78 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 MIR6820-201ENST00000611508 62 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AC073349.3-201ENST00000617616 186 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 AC048347.1-201ENST00000624621 427 ntBASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN4Q6PJG9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms