Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RPL21P39-201ENST00000463605 483 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 RPL23AP67-201ENST00000465341 474 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AC087190.1-201ENST00000484462 480 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AC093591.1-201ENST00000491435 481 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 RPL21P16-201ENST00000495531 483 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AC005668.1-201ENST00000571142 476 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 MIR3944-201ENST00000581277 108 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 U3.45-201ENST00000607547 219 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AC012314.7-201ENST00000619693 93 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 U4.6-201ENST00000621618 127 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 MFSD8-233ENST00000641482 4860 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 RPL9P7-201ENST00000330965 580 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 SNORD62.1-201ENST00000362541 86 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 RNU1-72P-201ENST00000362976 153 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 U3.6-201ENST00000363622 211 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 SNORD32A-201ENST00000364805 84 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 RNU1-57P-201ENST00000384491 166 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 Y_RNA.529-201ENST00000384586 119 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 RNU6-306P-201ENST00000384617 107 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 MIR449B-201ENST00000384995 97 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AL031121.1-201ENST00000406553 254 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 YME1L1P1-201ENST00000429435 297 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AC104389.3-201ENST00000445629 235 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 PRSS3P4-201ENST00000453323 162 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 FGF7P4-201ENST00000509595 295 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AC245166.1-201ENST00000521012 253 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 RAB11AP2-201ENST00000545905 639 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AC105137.2-201ENST00000569073 466 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 RPS3AP23-202ENST00000574601 686 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AL117336.2-201ENST00000602435 335 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AP001836.1-201ENST00000604675 523 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 RNU1-30P-201ENST00000606575 163 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AC025253.1-201ENST00000613623 543 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AC009093.8-201ENST00000641769 292 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 AC135776.4-201ENST00000624300 1904 ntBASIC3.25□□□□□ -1.89
PPP4R4Q6NUP7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AL356968.1-201ENST00000416622 474 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 snoU13.14-201ENST00000459372 104 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 RPL9P9-202ENST00000466501 579 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AC091874.1-201ENST00000511402 339 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 SNORA70.18-201ENST00000516696 98 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 RNU6-612P-201ENST00000516909 102 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AC026403.1-201ENST00000518938 295 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 MIR5571-201ENST00000577998 113 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AC073410.2-201ENST00000603240 332 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AL159153.1-201ENST00000619688 317 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AC112487.2-201ENST00000637950 304 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 AC017071.1-201ENST00000564407 2204 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.24□□□□□ -1.89
PPP4R4Q6NUP7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 SNORD9-201ENST00000362566 104 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 RNU6-529P-201ENST00000363383 104 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 MIR186-201ENST00000384988 86 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 MIR517A-201ENST00000385001 87 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 MIR887-201ENST00000401258 79 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 CYCSP48-201ENST00000417124 323 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 SYF2P2-201ENST00000417620 583 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AL139396.1-201ENST00000421137 167 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 RPL7P49-201ENST00000471402 708 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 RPS27P27-201ENST00000498779 255 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 RN7SKP24-201ENST00000515888 284 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 RPPH1-2P-201ENST00000516688 293 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms