Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC236972.2-201ENST00000434979 310 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 UQCRHP3-201ENST00000451503 251 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 FTH1P2-201ENST00000466086 412 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AC007536.1-201ENST00000533382 349 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AC069200.1-201ENST00000609511 323 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AL121772.2-201ENST00000614331 297 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 AC010329.5-201ENST00000623497 2174 ntBASIC3.16□□□□□ -1.9
RNF220Q5VTB9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF220Q5VTB9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.9
RNF220Q5VTB9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF220Q5VTB9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RNF220Q5VTB9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
RNF220Q5VTB9 Z75746.1-201ENST00000440243 2080 ntBASIC3.15□□□□□ -1.9
RNF220Q5VTB9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF220Q5VTB9 RNU6-486P-201ENST00000363116 107 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RNA5SP479-201ENST00000364858 117 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 SNORA5A-201ENST00000384111 134 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AL031121.1-201ENST00000406553 254 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 NUP35P1-201ENST00000422734 947 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RPL23AP95-201ENST00000426806 265 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 MICF-203ENST00000432679 129 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC236972.1-201ENST00000433225 199 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.632-201ENST00000459189 102 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 SNRPGP7-201ENST00000469016 106 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RPS26P21-201ENST00000475397 348 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.670-201ENST00000516255 105 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RNA5SP76-201ENST00000516277 87 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RNU1-95P-201ENST00000516357 160 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RNU1-128P-201ENST00000516704 160 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 MIR4273-201ENST00000582824 84 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC011494.1-201ENST00000596454 237 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AP000654.2-201ENST00000605633 586 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 MIR6733-201ENST00000635723 61 ntBASIC3.15□□□□□ -1.91
RNF220Q5VTB9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF220Q5VTB9 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 MTND4P29-201ENST00000503122 1372 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 KPNA2P1-201ENST00000458289 1591 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 OR56A5-201ENST00000340110 738 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.58-201ENST00000362807 102 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 RNU6-529P-201ENST00000363383 104 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.154-201ENST00000363624 102 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 RNY3P1-201ENST00000365085 102 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 RNY3-201ENST00000365484 102 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AL359837.1-201ENST00000381357 287 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.490-201ENST00000384413 102 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.509-201ENST00000384506 99 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 SNORA75.4-201ENST00000391278 119 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AL591034.2-201ENST00000402839 359 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 CYCSP48-201ENST00000417124 323 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 MTCO2P27-201ENST00000420740 428 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC078809.1-201ENST00000427601 140 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 RN7SL499P-201ENST00000481141 276 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC104619.4-201ENST00000510773 249 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC115990.1-201ENST00000526957 301 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 APOOP3-201ENST00000536787 586 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 HSPE1P4-201ENST00000550617 308 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC109446.1-201ENST00000566172 220 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 MTCO3P13-201ENST00000577757 781 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC073410.2-201ENST00000603240 332 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC009229.3-201ENST00000608056 282 ntBASIC3.14□□□□□ -1.91
RNF220Q5VTB9 AC069234.5-201ENST00000611056 416 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms