Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC025465.4-201ENST00000513422 638 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 SNORA9.3-201ENST00000516383 129 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 RNU6-323P-201ENST00000521915 107 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 CYCSP27-201ENST00000527643 293 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.83□□□□□ -1.96
USP41Q3LFD5 RPL23AP78-201ENST00000599928 470 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 APOOP1-201ENST00000604695 592 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 RNU6-85P-201ENST00000605989 107 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.83□□□□□ -1.96
USP41Q3LFD5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.83□□□□□ -1.96
USP41Q3LFD5 AC093913.1-201ENST00000614178 329 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.83□□□□□ -1.96
USP41Q3LFD5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.83□□□□□ -1.96
USP41Q3LFD5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.83□□□□□ -1.96
USP41Q3LFD5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.83□□□□□ -1.96
USP41Q3LFD5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.83□□□□□ -1.96
USP41Q3LFD5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
USP41Q3LFD5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC138393.1-203ENST00000327086 343 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 RNU6-1252P-201ENST00000363054 104 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.82□□□□□ -1.96
USP41Q3LFD5 RPS27AP9-201ENST00000477681 438 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC116353.2-201ENST00000505332 712 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USP41Q3LFD5 RNA5SP282-201ENST00000516355 108 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 BTF3P12-201ENST00000519620 469 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.82□□□□□ -1.96
USP41Q3LFD5 ELOCP31-201ENST00000540463 467 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AP002770.2-201ENST00000543613 532 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC004486.1-201ENST00000546846 233 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC007151.1-201ENST00000572774 483 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 MIR3670-2-201ENST00000582974 65 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 MIR3670-1-201ENST00000584160 65 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 MIR3670-3-201ENST00000584855 65 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC008739.2-201ENST00000597006 317 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC008121.1-201ENST00000603244 268 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AP000787.2-201ENST00000604432 568 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC123912.5-201ENST00000605470 343 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 MIR3670-4-201ENST00000612260 65 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 SCARNA4-202ENST00000625402 129 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.82□□□□□ -1.96
USP41Q3LFD5 ZNF519P1-201ENST00000449011 1626 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 AC121333.1-201ENST00000567488 2709 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USP41Q3LFD5 MAPK10-266ENST00000641066 6555 ntBASIC2.82□□□□□ -1.96
USP41Q3LFD5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.81□□□□□ -1.96
USP41Q3LFD5 Y_RNA.160-201ENST00000363677 92 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 AL139095.1-201ENST00000404326 391 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.81□□□□□ -1.96
USP41Q3LFD5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.81□□□□□ -1.96
USP41Q3LFD5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.81□□□□□ -1.96
USP41Q3LFD5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.81□□□□□ -1.96
USP41Q3LFD5 RNU6-1314P-201ENST00000517139 104 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 AP004607.1-201ENST00000524456 203 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.81□□□□□ -1.96
USP41Q3LFD5 AC091544.4-201ENST00000555268 342 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
USP41Q3LFD5 MIR5692C1-201ENST00000585309 91 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 AC018638.8-201ENST00000588755 281 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 AC005046.1-201ENST00000608515 625 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
USP41Q3LFD5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USP41Q3LFD5 AC010378.1-201ENST00000619270 362 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 Z69720.2-201ENST00000624755 279 ntBASIC2.81□□□□□ -1.96
USP41Q3LFD5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
USP41Q3LFD5 SNORD62.1-201ENST00000362541 86 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 Y_RNA.100-201ENST00000363141 102 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 RNU5E-7P-201ENST00000365290 117 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 Y_RNA.390-201ENST00000383932 102 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 Y_RNA.530-201ENST00000384587 101 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 RNU6-19P-201ENST00000384718 107 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 MT-TL1-201ENST00000386347 75 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 FTH1P15-201ENST00000406984 280 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 AC096649.2-201ENST00000416186 393 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 OOSP1P1-201ENST00000423265 274 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 AC009296.1-201ENST00000443146 155 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 MRPL42P6-201ENST00000486397 371 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.8□□□□□ -1.96
USP41Q3LFD5 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
USP41Q3LFD5 FAM206BP-201ENST00000510179 541 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 MRPS36P2-201ENST00000512569 299 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 RNU6-1069P-201ENST00000516612 133 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 ACA59.2-201ENST00000517061 156 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USP41Q3LFD5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.8□□□□□ -1.96
USP41Q3LFD5 AC025423.5-201ENST00000550230 219 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 PSMA3P-201ENST00000555485 635 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.8□□□□□ -1.96
USP41Q3LFD5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.8□□□□□ -1.96
USP41Q3LFD5 OR1M4P-201ENST00000589199 287 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 AC091152.3-201ENST00000604227 325 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.8□□□□□ -1.96
USP41Q3LFD5 AL136221.1-201ENST00000621449 509 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms