Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MTCO3P23-201ENST00000561363 289 ntBASIC3.34□□□□□ -1.87
TRIM71Q2Q1W2 HMGN2P15-201ENST00000585707 270 ntBASIC3.34□□□□□ -1.87
TRIM71Q2Q1W2 AC091903.1-201ENST00000624322 454 ntBASIC3.34□□□□□ -1.87
TRIM71Q2Q1W2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM71Q2Q1W2 AL365361.1-201ENST00000566942 3481 ntBASIC3.34□□□□□ -1.87
TRIM71Q2Q1W2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM71Q2Q1W2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM71Q2Q1W2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 SNORA22B-201ENST00000383876 138 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 SNORD116-11-201ENST00000383882 92 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 Y_RNA.480-201ENST00000384364 102 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 Y_RNA.482-201ENST00000384377 111 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 MIR10A-201ENST00000385043 110 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 MIR34A-201ENST00000385130 110 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 RNU6-55P-201ENST00000411092 107 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 RNU6-954P-201ENST00000411355 107 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AL353621.1-201ENST00000418219 243 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 PMCHL1-202ENST00000423102 261 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AL627311.1-201ENST00000431514 115 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AL137792.2-201ENST00000443484 235 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 RPL32P28-201ENST00000443577 397 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 MTATP6P7-201ENST00000453315 681 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 RPS27P27-201ENST00000498779 255 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AC079140.5-201ENST00000507882 310 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 RNA5SP367-201ENST00000516557 118 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 RNU6-1183P-201ENST00000517054 60 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AC010653.1-201ENST00000571108 881 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 ELOCP29-201ENST00000588193 334 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AC016925.2-201ENST00000605108 242 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AC004852.3-201ENST00000614131 326 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AL138726.1-201ENST00000614873 333 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 uc_338.22-201ENST00000622722 187 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 AC244517.12-201ENST00000623581 663 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 U2.21-201ENST00000637295 81 ntBASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM71Q2Q1W2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC008264.2-201ENST00000610193 3731 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 RNA5SP126-201ENST00000365092 109 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 RNU6-166P-201ENST00000384371 107 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 RNU6-1304P-201ENST00000411374 106 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 ATG3P1-201ENST00000419507 911 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 MYL8P-204ENST00000431574 518 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 MTND3P2-201ENST00000438452 342 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 RNU1-86P-201ENST00000516108 154 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 RNU1-107P-201ENST00000516617 154 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 SNORD59.2-201ENST00000516873 68 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 RNU6-703P-201ENST00000516946 107 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 SNRPGP18-201ENST00000553000 214 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 LINC00933-203ENST00000559812 219 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC138761.3-201ENST00000579993 334 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 MIR3671-201ENST00000580455 88 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 MIR3941-201ENST00000582572 103 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC136443.5-201ENST00000603741 370 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AL645944.1-201ENST00000603857 493 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC002044.1-201ENST00000606707 158 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 FAM157A-202ENST00000615155 405 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 ZNF519P1-201ENST00000449011 1626 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 ADAM3A-203ENST00000461344 2157 ntBASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM71Q2Q1W2 AC103988.1-201ENST00000566382 2177 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 Y_RNA.31-201ENST00000362574 102 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 Y_RNA.112-201ENST00000363250 102 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 AP002088.1-201ENST00000382740 395 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 RNU6-607P-201ENST00000411283 108 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 AL139281.1-201ENST00000422120 335 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 HMGB1P9-201ENST00000429856 646 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 RPL21P2-201ENST00000440049 481 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
TRIM71Q2Q1W2 BTF3P15-201ENST00000455606 336 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms