Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
PDS5AQ29RF7 RNU6-254P-201ENST00000363377 107 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 Y_RNA.142-201ENST00000363491 102 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 SNORD113-7-201ENST00000363762 77 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 Y_RNA.263-201ENST00000364659 114 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 DEFA7P-201ENST00000382676 285 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 Y_RNA.414-201ENST00000384011 101 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PDS5AQ29RF7 FAT1P1-201ENST00000406588 507 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 RN7SKP223-201ENST00000410582 62 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 SNRPEP4-201ENST00000435815 279 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 BRK1P2-201ENST00000442875 223 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.86□□□□□ -1.95
PDS5AQ29RF7 AC139453.3-201ENST00000493276 369 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.86□□□□□ -1.95
PDS5AQ29RF7 TBCAP3-201ENST00000512475 312 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 RNU6-1069P-201ENST00000516612 133 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 RNU7-30P-201ENST00000516835 62 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 AC025755.1-201ENST00000521306 278 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.86□□□□□ -1.95
PDS5AQ29RF7 RPL23AP88-201ENST00000605759 454 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 AC104985.2-201ENST00000620598 500 ntBASIC2.86□□□□□ -1.95
PDS5AQ29RF7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 MIR412-201ENST00000362142 91 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 Y_RNA.301-201ENST00000364990 103 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 SNORA75B-201ENST00000384053 137 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 RNU6-1179P-201ENST00000384667 107 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 RNU1-101P-201ENST00000391171 127 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 RNU2-3P-201ENST00000410144 191 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 RNA5SP425-201ENST00000410336 112 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 CYCSP33-201ENST00000414485 327 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 HSPE1P1-201ENST00000421494 318 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 MTND4LP16-201ENST00000440828 295 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 NDUFB1P2-201ENST00000449477 176 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 TRBV12-1-201ENST00000479785 344 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 HMGB1P30-201ENST00000492455 606 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 RPS27P27-201ENST00000498779 255 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 RNU6-703P-201ENST00000516946 107 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.85□□□□□ -1.95
PDS5AQ29RF7 MIR1273D-201ENST00000577266 86 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 MIR4742-201ENST00000581069 85 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 MIR6076-201ENST00000617521 113 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 AL031601.2-202ENST00000622650 282 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 U2.21-201ENST00000637295 81 ntBASIC2.85□□□□□ -1.95
PDS5AQ29RF7 AC103988.1-201ENST00000566382 2177 ntBASIC2.84□□□□□ -1.95
PDS5AQ29RF7 RNU6-1035P-201ENST00000384477 107 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
PDS5AQ29RF7 SNORA40C-201ENST00000391285 128 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 RPS4XP3-201ENST00000398541 413 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 HMGN2P35-201ENST00000412164 270 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 Z98742.3-201ENST00000418637 326 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.84□□□□□ -1.96
PDS5AQ29RF7 AC093019.1-201ENST00000443135 252 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.84□□□□□ -1.96
PDS5AQ29RF7 AL590664.1-201ENST00000448065 339 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 TRBVA-201ENST00000498804 316 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 FGF7P4-201ENST00000509595 295 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 RNU6-864P-201ENST00000516256 108 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 SNORA25.17-201ENST00000517184 124 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.84□□□□□ -1.96
PDS5AQ29RF7 RAB11AP2-201ENST00000545905 639 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.84□□□□□ -1.96
PDS5AQ29RF7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.84□□□□□ -1.96
PDS5AQ29RF7 AL117336.2-201ENST00000602435 335 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 C8orf59P2-201ENST00000603441 271 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 HSPE1P7-201ENST00000604681 321 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 AL022345.1-201ENST00000607292 135 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PDS5AQ29RF7 Y_RNA.804-201ENST00000615262 101 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 RMST_4.1-201ENST00000616886 107 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PDS5AQ29RF7 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.84□□□□□ -1.96
PDS5AQ29RF7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDS5AQ29RF7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
PDS5AQ29RF7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDS5AQ29RF7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDS5AQ29RF7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDS5AQ29RF7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDS5AQ29RF7 RNU6-797P-201ENST00000363101 109 ntBASIC2.83□□□□□ -1.96
PDS5AQ29RF7 RNU6-270P-201ENST00000364131 105 ntBASIC2.83□□□□□ -1.96
PDS5AQ29RF7 RNU6-1013P-201ENST00000384180 107 ntBASIC2.83□□□□□ -1.96
PDS5AQ29RF7 AL356432.1-201ENST00000405809 419 ntBASIC2.83□□□□□ -1.96
PDS5AQ29RF7 RNA5SP38-201ENST00000410750 119 ntBASIC2.83□□□□□ -1.96
PDS5AQ29RF7 AL096701.2-201ENST00000416920 238 ntBASIC2.83□□□□□ -1.96
PDS5AQ29RF7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.83□□□□□ -1.96
PDS5AQ29RF7 AL365400.1-201ENST00000431854 640 ntBASIC2.83□□□□□ -1.96
PDS5AQ29RF7 AC018634.1-201ENST00000437554 401 ntBASIC2.83□□□□□ -1.96
PDS5AQ29RF7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms