Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS72Q15906 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS72Q15906 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.88□□□□□ -1.79
VPS72Q15906 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS72Q15906 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS72Q15906 AL158827.2-201ENST00000602494 330 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 AC004805.2-201ENST00000605382 482 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 AP000654.2-201ENST00000605633 586 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 AL121655.1-201ENST00000605811 308 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS72Q15906 FTX_3.1-201ENST00000610451 147 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 MIR6128-201ENST00000615528 109 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 AL691447.3-201ENST00000635020 330 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 AL669831.3-213ENST00000636676 183 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS72Q15906 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS72Q15906 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS72Q15906 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
VPS72Q15906 KPNA2P1-201ENST00000458289 1591 ntBASIC3.88□□□□□ -1.79
VPS72Q15906 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS72Q15906 MTND4P1-201ENST00000457501 1466 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS72Q15906 RNA5SP68-201ENST00000363885 119 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 RNU6-593P-201ENST00000364716 112 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
VPS72Q15906 SNORA3.2-201ENST00000408221 125 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 RNU2-68P-201ENST00000410878 191 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 ATG3P1-201ENST00000419507 911 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 AL590632.1-201ENST00000424289 371 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 SNRPEP9-201ENST00000436794 238 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 HMGB3P8-201ENST00000449709 577 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 AC087884.1-201ENST00000469738 328 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 RPL7P42-201ENST00000481005 679 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS72Q15906 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS72Q15906 ANXA2P1-201ENST00000505539 926 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 RNU6-1016P-201ENST00000516689 94 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 RNA5SP471-201ENST00000516971 106 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.87□□□□□ -1.79
VPS72Q15906 RNU6-323P-201ENST00000521915 107 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 IGHV3-76-201ENST00000522465 295 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS72Q15906 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS72Q15906 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS72Q15906 AL161798.1-201ENST00000604630 131 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 MIR6817-201ENST00000615588 66 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 AC022418.1-201ENST00000624118 445 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 SNORA50A-202ENST00000629536 136 ntBASIC3.87□□□□□ -1.79
VPS72Q15906 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS72Q15906 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS72Q15906 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS72Q15906 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS72Q15906 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS72Q15906 U8.2-201ENST00000363156 134 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 RNU6-128P-201ENST00000383976 107 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 RNU6-817P-201ENST00000391083 104 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 AL356057.3-201ENST00000402607 340 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS72Q15906 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS72Q15906 AL160275.3-201ENST00000423876 471 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 RPL7P37-201ENST00000425095 738 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS72Q15906 AL591212.2-201ENST00000433923 257 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 RPL26P9-201ENST00000457466 433 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 MTND5P22-201ENST00000458380 195 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 snoU13.23-201ENST00000458863 104 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS72Q15906 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS72Q15906 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS72Q15906 RNA5SP165-201ENST00000517142 115 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 RN7SKP295-201ENST00000517264 153 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS72Q15906 AC100830.2-201ENST00000581636 240 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 AC007318.2-201ENST00000620999 243 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 AC091925.1-201ENST00000623204 462 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 AL078596.1-201ENST00000624856 447 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 ZNF658B-202ENST00000615961 3375 ntBASIC3.86□□□□□ -1.79
VPS72Q15906 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS72Q15906 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS72Q15906 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS72Q15906 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.85□□□□□ -1.79
VPS72Q15906 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS72Q15906 RNU1-105P-201ENST00000363470 161 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 Y_RNA.148-201ENST00000363557 117 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 RNU6-884P-201ENST00000363889 107 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 SNORA9.2-201ENST00000365361 133 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 RNU6-1040P-201ENST00000383974 107 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS72Q15906 HMGN2P30-201ENST00000423237 256 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 AL603825.1-201ENST00000438481 80 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS72Q15906 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS72Q15906 AC097473.1-201ENST00000508142 408 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 AC116337.1-201ENST00000509680 687 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 AC104136.1-201ENST00000512969 394 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 SNORA31.3-201ENST00000516029 96 ntBASIC3.85□□□□□ -1.79
VPS72Q15906 RNU6-976P-201ENST00000516086 111 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms