Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC010620.1-201ENST00000601088 1102 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 AC002550.2-201ENST00000621246 394 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 AC080188.3-201ENST00000624842 748 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 AC068205.3-201ENST00000636385 468 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 RNA5SP493-201ENST00000364115 91 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 RNU1-96P-201ENST00000364163 162 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AC008267.5-201ENST00000424928 265 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 AL589872.1-201ENST00000426602 288 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF1Q10570 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.38□□□□□ -2.35
CPSF1Q10570 VN1R82P-201ENST00000601481 356 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 AP003465.2-201ENST00000602571 373 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 AC090617.9-201ENST00000623751 147 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 U6.101-201ENST00000637707 76 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.38□□□□□ -2.35
CPSF1Q10570 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CPSF1Q10570 SNORD114-19-201ENST00000363072 75 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.38□□□□□ -2.35
CPSF1Q10570 MIR19B1-201ENST00000384829 87 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 MTATP6P27-201ENST00000416987 621 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 AC114482.1-201ENST00000418010 247 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 SNX2P2-201ENST00000424553 323 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 C8orf59P1-201ENST00000429930 303 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF1Q10570 RN7SKP88-201ENST00000516847 250 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.38□□□□□ -2.35
CPSF1Q10570 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.38□□□□□ -2.35
CPSF1Q10570 7SK.8-201ENST00000612110 250 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 7SK.11-201ENST00000615477 250 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 7SK.13-201ENST00000622040 250 ntBASIC0.38□□□□□ -2.35
CPSF1Q10570 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CPSF1Q10570 AC092447.10-201ENST00000620607 1652 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CPSF1Q10570 SNORD114-24-201ENST00000365029 72 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 RNU6-418P-201ENST00000384035 107 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 RNU6-296P-201ENST00000384608 107 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 RNU2-28P-201ENST00000410457 189 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 BTF3L4P3-201ENST00000418879 476 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.37□□□□□ -2.35
CPSF1Q10570 AL096829.2-201ENST00000446582 742 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 VN1R10P-201ENST00000447106 875 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 RPL30P6-201ENST00000475925 342 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AC013828.1-201ENST00000481845 158 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AC010460.2-201ENST00000509054 677 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 RNU6-1092P-201ENST00000516955 87 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AC015688.6-201ENST00000577737 104 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 MIR3169-201ENST00000578032 83 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AC008751.2-201ENST00000597885 980 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AC091057.3-201ENST00000602684 733 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AC107952.2-201ENST00000606048 486 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AC098614.4-201ENST00000607601 462 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AL133445.2-201ENST00000611191 527 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 AL596245.1-201ENST00000618994 362 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 DBF4P1-201ENST00000412976 1892 ntBASIC0.37□□□□□ -2.35
CPSF1Q10570 RNU6-288P-201ENST00000363690 104 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 AC092634.6-201ENST00000418558 192 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 AC010153.1-201ENST00000432862 727 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.36□□□□□ -2.35
CPSF1Q10570 AC093259.1-201ENST00000509755 300 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 RNU4-77P-201ENST00000516692 156 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 RNA5SP135-201ENST00000517019 125 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.36□□□□□ -2.35
CPSF1Q10570 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 AC093249.1-201ENST00000567049 203 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 AC107905.1-201ENST00000616204 426 ntBASIC0.36□□□□□ -2.35
CPSF1Q10570 RNU6-657P-201ENST00000383904 107 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 RNU6-637P-201ENST00000384050 107 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 RNU6-160P-201ENST00000384591 107 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CPSF1Q10570 MTND4P6-201ENST00000438297 472 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.35□□□□□ -2.35
CPSF1Q10570 SNORD124-201ENST00000459577 104 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 BET1P1-201ENST00000482276 359 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 MTCYBP40-201ENST00000509390 1135 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.35□□□□□ -2.35
CPSF1Q10570 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.35□□□□□ -2.35
CPSF1Q10570 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.35□□□□□ -2.35
CPSF1Q10570 AC023824.3-201ENST00000569003 562 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 AL139344.1-201ENST00000605228 195 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 AC112220.2-201ENST00000605513 533 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 AC130454.1-201ENST00000622948 401 ntBASIC0.35□□□□□ -2.35
CPSF1Q10570 RNU6-35P-201ENST00000384530 107 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
CPSF1Q10570 RNA5SP299-201ENST00000391203 116 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 RPS26P5-201ENST00000418544 335 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 AC010099.3-201ENST00000423896 409 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 RAC1P8-201ENST00000427086 527 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 TIMM9P1-201ENST00000436122 256 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 HSPE1P9-201ENST00000440046 311 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CPSF1Q10570 OR6C5P-201ENST00000452388 923 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 RNA5SP269-201ENST00000459032 137 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms