Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.14□□□□□ -1.91
DDR1Q08345 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
DDR1Q08345 AC009163.5-201ENST00000575421 637 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.14□□□□□ -1.91
DDR1Q08345 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
DDR1Q08345 AC012409.4-201ENST00000612923 249 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 AL589994.2-201ENST00000621124 579 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 MTND5P42-201ENST00000637720 498 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 AC100810.6-201ENST00000638068 285 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDR1Q08345 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDR1Q08345 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDR1Q08345 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DDR1Q08345 RNU6-270P-201ENST00000364131 105 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 RNU6-550P-201ENST00000391057 101 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 MIR888-201ENST00000401186 77 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 RNU4-46P-201ENST00000410818 138 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 AC007064.1-201ENST00000412238 351 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.13□□□□□ -1.91
DDR1Q08345 MTCO3P46-201ENST00000425787 232 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 AL356320.1-201ENST00000429616 163 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 ERLEC1P1-201ENST00000433806 578 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 HMGB1P18-201ENST00000438801 619 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 NEFMP1-201ENST00000443423 1006 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 CCDC34P1-201ENST00000507441 517 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 AC104806.1-201ENST00000508720 308 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.13□□□□□ -1.91
DDR1Q08345 Y_RNA.665-201ENST00000516177 98 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 RNA5SP290-201ENST00000517133 127 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.13□□□□□ -1.91
DDR1Q08345 AC023050.3-201ENST00000541142 333 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 AL442663.2-201ENST00000554385 511 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 PSMA3P-201ENST00000555485 635 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 MIR1273D-201ENST00000577266 86 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 DPPA3P3-201ENST00000603842 430 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 AC046143.2-201ENST00000609789 160 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.13□□□□□ -1.91
DDR1Q08345 RMST_7.1-201ENST00000621935 268 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DDR1Q08345 AC090617.10-201ENST00000624308 134 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.13□□□□□ -1.91
DDR1Q08345 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDR1Q08345 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
DDR1Q08345 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
DDR1Q08345 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDR1Q08345 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.13□□□□□ -1.91
DDR1Q08345 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
DDR1Q08345 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DDR1Q08345 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.12□□□□□ -1.91
DDR1Q08345 Y_RNA.166-201ENST00000363730 102 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 Y_RNA.245-201ENST00000364493 95 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 SNORA75.4-201ENST00000391278 119 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 RPL21P75-201ENST00000396599 483 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 RPL21P28-201ENST00000401418 483 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AL592114.1-201ENST00000403842 483 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 OR6C66P-201ENST00000414917 930 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 DPH3P2-201ENST00000422618 250 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AL353729.1-201ENST00000425044 720 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.12□□□□□ -1.91
DDR1Q08345 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.12□□□□□ -1.91
DDR1Q08345 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.12□□□□□ -1.91
DDR1Q08345 RPL21P39-201ENST00000463605 483 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AC008571.1-201ENST00000467232 300 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 RPL21P93-201ENST00000480465 489 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AC087190.1-201ENST00000484462 480 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AC093591.1-201ENST00000491435 481 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 RPL21P16-201ENST00000495531 483 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AC103851.1-201ENST00000506833 274 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.12□□□□□ -1.91
DDR1Q08345 AC112206.3-201ENST00000514578 389 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 SNORA9.3-201ENST00000516383 129 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.12□□□□□ -1.91
DDR1Q08345 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDR1Q08345 AL137161.1-201ENST00000532231 390 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 BNIP3P6-201ENST00000549284 499 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AL118558.2-201ENST00000556294 238 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 MIR5583-1-201ENST00000580941 59 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 AP000787.2-201ENST00000604432 568 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 FTX_3.1-201ENST00000610451 147 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
DDR1Q08345 MTND5P6-201ENST00000422338 1798 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.12□□□□□ -1.91
DDR1Q08345 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DDR1Q08345 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.11□□□□□ -1.91
DDR1Q08345 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.11□□□□□ -1.91
DDR1Q08345 NACAP2-201ENST00000318548 624 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 SNORD114-1-201ENST00000362705 72 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 Y_RNA.184-201ENST00000363884 108 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 Y_RNA.216-201ENST00000364205 93 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 MIR767-201ENST00000390228 109 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 RNU6-482P-201ENST00000391068 107 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 AC092809.3-201ENST00000415453 231 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.11□□□□□ -1.91
DDR1Q08345 CALM2P2-201ENST00000428512 440 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.11□□□□□ -1.91
DDR1Q08345 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.11□□□□□ -1.91
DDR1Q08345 RNU6-123P-201ENST00000516163 102 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 RNA5SP281-201ENST00000516504 135 ntBASIC3.11□□□□□ -1.91
DDR1Q08345 AC107953.1-201ENST00000522216 297 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms