Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN1BQ07699 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.27□□□□□ -2.05
SCN1BQ07699 AC087683.1-201ENST00000591187 441 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN1BQ07699 AL160281.1-201ENST00000605307 311 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 AC139792.3-201ENST00000623525 224 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SCN1BQ07699 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.27□□□□□ -2.05
SCN1BQ07699 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCN1BQ07699 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCN1BQ07699 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SCN1BQ07699 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SCN1BQ07699 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCN1BQ07699 MIR208A-201ENST00000362287 71 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 RNU1-112P-201ENST00000364401 164 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 Y_RNA.255-201ENST00000364581 97 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 RNU6-692P-201ENST00000384496 107 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 MIR128-1-201ENST00000384921 82 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 MIR29B2-201ENST00000385055 81 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 AL117339.3-201ENST00000418733 162 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.26□□□□□ -2.05
SCN1BQ07699 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN1BQ07699 RPS3AP12-201ENST00000443616 753 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN1BQ07699 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN1BQ07699 RPS3P1-201ENST00000456781 192 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 AC107032.1-201ENST00000485945 480 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 CCDC34P1-201ENST00000507441 517 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SCN1BQ07699 AC079140.5-201ENST00000507882 310 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 RNA5SP137-201ENST00000516833 135 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 AC069113.1-201ENST00000517763 267 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 MTND4P7-201ENST00000523876 130 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN1BQ07699 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN1BQ07699 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SCN1BQ07699 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN1BQ07699 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.26□□□□□ -2.05
SCN1BQ07699 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN1BQ07699 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCN1BQ07699 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SCN1BQ07699 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.26□□□□□ -2.05
SCN1BQ07699 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN1BQ07699 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SCN1BQ07699 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SCN1BQ07699 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SCN1BQ07699 Y_RNA.333-201ENST00000365274 102 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 RNU6-827P-201ENST00000365553 106 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 RNU6-546P-201ENST00000383991 107 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 SNORA44-201ENST00000384584 132 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 SNORD37.1-201ENST00000390968 65 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 SNORA11-201ENST00000408789 128 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN1BQ07699 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
SCN1BQ07699 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.25□□□□□ -2.05
SCN1BQ07699 MTND1P29-201ENST00000448112 647 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 MTCO2P18-201ENST00000457151 658 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 S100A11P2-201ENST00000467589 312 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 AC055731.1-201ENST00000474387 401 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.25□□□□□ -2.05
SCN1BQ07699 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.25□□□□□ -2.05
SCN1BQ07699 HIGD1AP13-201ENST00000509878 289 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 SNORA40.12-201ENST00000516329 111 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 RNU6-965P-201ENST00000516721 96 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.25□□□□□ -2.05
SCN1BQ07699 CYCSP27-201ENST00000527643 293 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 AC103996.1-201ENST00000555468 102 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.25□□□□□ -2.05
SCN1BQ07699 AC245008.1-201ENST00000608123 476 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN1BQ07699 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SCN1BQ07699 MTND5P26-201ENST00000426018 1752 ntBASIC2.25□□□□□ -2.05
SCN1BQ07699 AC007336.1-201ENST00000576365 3828 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 Y_RNA.409-201ENST00000383990 98 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 SNORA48.2-201ENST00000390926 124 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 RNA5SP219-201ENST00000390940 113 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AL162578.1-201ENST00000406202 378 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 RNU2-66P-201ENST00000410650 161 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 HMGB3P2-201ENST00000411913 584 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.24□□□□□ -2.05
SCN1BQ07699 USP9YP14-201ENST00000430663 563 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 VN1R108P-201ENST00000431580 830 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 RPS15AP10-201ENST00000432472 382 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AL121601.2-201ENST00000438019 707 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AL135938.1-201ENST00000443141 297 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 Z83846.1-201ENST00000446798 265 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 FDX1P2-201ENST00000450769 375 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC013470.1-201ENST00000453438 462 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC087884.1-201ENST00000469738 328 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AK3P2-201ENST00000507976 429 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.24□□□□□ -2.05
SCN1BQ07699 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN1BQ07699 NDUFA5P6-201ENST00000542110 379 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC074050.1-201ENST00000563247 211 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC026271.5-201ENST00000577873 130 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 BNIP3P16-201ENST00000589779 534 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC007229.1-201ENST00000590455 412 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms