Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.33□□□□□ -2.04
GABPAQ06546 RPL22P13-201ENST00000493291 347 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.33□□□□□ -2.04
GABPAQ06546 AC074344.1-201ENST00000512823 224 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 MIR892C-201ENST00000516410 77 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.33□□□□□ -2.04
GABPAQ06546 AC110588.1-201ENST00000559699 137 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
GABPAQ06546 AC245008.1-201ENST00000608123 476 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 Z99129.1-201ENST00000612510 255 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
GABPAQ06546 MIR7157-201ENST00000635801 60 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.33□□□□□ -2.04
GABPAQ06546 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.33□□□□□ -2.04
GABPAQ06546 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
GABPAQ06546 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
GABPAQ06546 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
GABPAQ06546 Z75746.1-201ENST00000440243 2080 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 RNU6-486P-201ENST00000363116 107 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AL663109.1-201ENST00000411498 844 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.32□□□□□ -2.04
GABPAQ06546 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.32□□□□□ -2.04
GABPAQ06546 AC097463.2-201ENST00000421074 142 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.32□□□□□ -2.04
GABPAQ06546 RPL30P4-201ENST00000429309 333 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 MICF-203ENST00000432679 129 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 CALM1P1-201ENST00000442082 433 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 MTCO2P18-201ENST00000457151 658 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AC090096.1-201ENST00000489168 390 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
GABPAQ06546 RNA5SP112-201ENST00000515937 99 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 Y_RNA.687-201ENST00000516558 91 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 RNU5B-3P-201ENST00000516601 115 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 RNU6-405P-201ENST00000516637 110 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AP004607.1-201ENST00000524456 203 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.32□□□□□ -2.04
GABPAQ06546 AC008752.3-201ENST00000588113 712 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AC087683.1-201ENST00000591187 441 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 SNRPGP19-201ENST00000603826 189 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AC091805.2-201ENST00000603848 235 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AC025754.2-201ENST00000606491 432 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 AC026585.1-201ENST00000619582 524 ntBASIC2.32□□□□□ -2.04
GABPAQ06546 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
GABPAQ06546 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
GABPAQ06546 Y_RNA.1-201ENST00000352915 104 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 AC068050.1-201ENST00000394891 380 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 RNU6-1140P-201ENST00000410517 106 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 RNU4-46P-201ENST00000410818 138 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.31□□□□□ -2.04
GABPAQ06546 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.31□□□□□ -2.04
GABPAQ06546 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.31□□□□□ -2.04
GABPAQ06546 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.31□□□□□ -2.04
GABPAQ06546 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.31□□□□□ -2.04
GABPAQ06546 RPL23AP42-201ENST00000471152 471 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 MED28P2-201ENST00000475771 317 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 AC105417.1-201ENST00000514691 285 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.31□□□□□ -2.04
GABPAQ06546 AC010186.2-204ENST00000537668 439 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 MTATP6P3-201ENST00000581686 676 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
GABPAQ06546 AL391646.1-201ENST00000603860 190 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.31□□□□□ -2.04
GABPAQ06546 AC097065.2-201ENST00000608159 533 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 AC069294.1-201ENST00000608397 350 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 AC138627.2-201ENST00000624202 601 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 AC005336.3-201ENST00000623833 2679 ntBASIC2.31□□□□□ -2.04
GABPAQ06546 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
GABPAQ06546 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
GABPAQ06546 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GABPAQ06546 OR4G2P-201ENST00000328113 903 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 RNU6-942P-201ENST00000363002 107 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 RNA5SP160-201ENST00000364866 120 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 RNU6-1103P-201ENST00000384150 107 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 RNU6-1072P-201ENST00000384703 107 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 RNU6-443P-201ENST00000384780 107 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 SNORD70.1-201ENST00000391007 85 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 RNU2-29P-201ENST00000410423 189 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 RNU4-55P-201ENST00000410731 137 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.3□□□□□ -2.04
GABPAQ06546 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.3□□□□□ -2.04
GABPAQ06546 AC016907.1-201ENST00000419483 435 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AL356010.1-201ENST00000456364 102 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 RNU7-63P-201ENST00000459054 62 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC108210.2-201ENST00000503681 201 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.3□□□□□ -2.04
GABPAQ06546 AC108078.1-201ENST00000508073 725 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 MTND3P5-201ENST00000512798 333 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 SMURF2P1-201ENST00000514992 481 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AK6P1-201ENST00000540219 478 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.3□□□□□ -2.04
GABPAQ06546 BNIP3P6-201ENST00000549284 499 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms