Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.86□□□□□ -2.27
CCL20P78556 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
CCL20P78556 LINC02555-201ENST00000563933 1951 ntBASIC0.85□□□□□ -2.27
CCL20P78556 Y_RNA.465-201ENST00000384293 102 ntBASIC0.85□□□□□ -2.27
CCL20P78556 RPS3AP36-201ENST00000398190 775 ntBASIC0.85□□□□□ -2.27
CCL20P78556 ERHP2-201ENST00000402323 299 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.85□□□□□ -2.27
CCL20P78556 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.85□□□□□ -2.27
CCL20P78556 KATNBL1P3-201ENST00000443475 909 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.85□□□□□ -2.27
CCL20P78556 AC006026.2-201ENST00000457376 180 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AL133373.1-201ENST00000497098 94 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.85□□□□□ -2.27
CCL20P78556 AC010587.2-201ENST00000511727 448 ntBASIC0.85□□□□□ -2.27
CCL20P78556 SNORA43.2-201ENST00000516652 128 ntBASIC0.85□□□□□ -2.27
CCL20P78556 RNA5SP490-201ENST00000517141 136 ntBASIC0.85□□□□□ -2.27
CCL20P78556 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.85□□□□□ -2.27
CCL20P78556 AC068587.4-201ENST00000533893 186 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.85□□□□□ -2.27
CCL20P78556 AC084364.2-201ENST00000546924 395 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AL161670.1-201ENST00000554348 137 ntBASIC0.85□□□□□ -2.27
CCL20P78556 DNAJC19P9-201ENST00000555084 351 ntBASIC0.85□□□□□ -2.27
CCL20P78556 MIR3937-201ENST00000580135 106 ntBASIC0.85□□□□□ -2.27
CCL20P78556 MIR4295-201ENST00000585286 85 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AC023043.2-201ENST00000589678 1026 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AL353778.1-201ENST00000603149 408 ntBASIC0.85□□□□□ -2.27
CCL20P78556 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.85□□□□□ -2.27
CCL20P78556 RNU4-91P-201ENST00000364778 135 ntBASIC0.84□□□□□ -2.27
CCL20P78556 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CCL20P78556 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.84□□□□□ -2.27
CCL20P78556 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CCL20P78556 RPL23AP30-201ENST00000432419 501 ntBASIC0.84□□□□□ -2.27
CCL20P78556 RPL32P28-201ENST00000443577 397 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.84□□□□□ -2.27
CCL20P78556 SNORD13-201ENST00000459299 104 ntBASIC0.84□□□□□ -2.27
CCL20P78556 RPL36AP21-201ENST00000490372 323 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AC093852.1-201ENST00000503587 266 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AC108078.1-201ENST00000508073 725 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AC097473.1-201ENST00000508142 408 ntBASIC0.84□□□□□ -2.27
CCL20P78556 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.84□□□□□ -2.27
CCL20P78556 MIR449C-201ENST00000516047 92 ntBASIC0.84□□□□□ -2.27
CCL20P78556 RNU1-92P-201ENST00000517017 135 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AC087441.2-201ENST00000529141 262 ntBASIC0.84□□□□□ -2.27
CCL20P78556 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.84□□□□□ -2.27
CCL20P78556 AC023050.2-201ENST00000544968 387 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.84□□□□□ -2.27
CCL20P78556 BNIP3P6-201ENST00000549284 499 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.84□□□□□ -2.27
CCL20P78556 HMGB1P33-201ENST00000563485 527 ntBASIC0.84□□□□□ -2.27
CCL20P78556 MTND4LP25-201ENST00000570218 163 ntBASIC0.84□□□□□ -2.27
CCL20P78556 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.84□□□□□ -2.27
CCL20P78556 AC091135.1-201ENST00000585943 307 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AL391001.1-201ENST00000602747 715 ntBASIC0.84□□□□□ -2.27
CCL20P78556 AL391813.2-201ENST00000609113 322 ntBASIC0.84□□□□□ -2.27
CCL20P78556 uc_338.12-201ENST00000616344 181 ntBASIC0.84□□□□□ -2.27
CCL20P78556 RMST_4.1-201ENST00000616886 107 ntBASIC0.84□□□□□ -2.27
CCL20P78556 U6.42-201ENST00000618440 107 ntBASIC0.84□□□□□ -2.27
CCL20P78556 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CCL20P78556 RNA5SP327-201ENST00000362494 101 ntBASIC0.83□□□□□ -2.28
CCL20P78556 MRPL35P1-201ENST00000404272 572 ntBASIC0.83□□□□□ -2.28
CCL20P78556 RPL37P10-201ENST00000412884 288 ntBASIC0.83□□□□□ -2.28
CCL20P78556 BTF3L4P1-201ENST00000413813 468 ntBASIC0.83□□□□□ -2.28
CCL20P78556 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.83□□□□□ -2.28
CCL20P78556 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.83□□□□□ -2.28
CCL20P78556 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.83□□□□□ -2.28
CCL20P78556 AL008629.1-201ENST00000438615 184 ntBASIC0.83□□□□□ -2.28
CCL20P78556 HSPE1P9-201ENST00000440046 311 ntBASIC0.83□□□□□ -2.28
CCL20P78556 RPL39P29-201ENST00000447779 157 ntBASIC0.83□□□□□ -2.28
CCL20P78556 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 HMGN2P18-201ENST00000450680 270 ntBASIC0.83□□□□□ -2.28
CCL20P78556 AL122001.1-201ENST00000457027 370 ntBASIC0.83□□□□□ -2.28
CCL20P78556 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 RNU1-131P-201ENST00000458943 161 ntBASIC0.83□□□□□ -2.28
CCL20P78556 RNA5SP269-201ENST00000459032 137 ntBASIC0.83□□□□□ -2.28
CCL20P78556 RPL9P9-202ENST00000466501 579 ntBASIC0.83□□□□□ -2.28
CCL20P78556 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.83□□□□□ -2.28
CCL20P78556 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.83□□□□□ -2.28
CCL20P78556 SNORA19.3-201ENST00000516165 130 ntBASIC0.83□□□□□ -2.28
CCL20P78556 RNU7-40P-201ENST00000516397 64 ntBASIC0.83□□□□□ -2.28
CCL20P78556 SNORA26.10-201ENST00000516427 141 ntBASIC0.83□□□□□ -2.28
CCL20P78556 AC091163.3-201ENST00000518269 1144 ntBASIC0.83□□□□□ -2.28
CCL20P78556 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL20P78556 AL606834.3-201ENST00000602615 496 ntBASIC0.83□□□□□ -2.28
CCL20P78556 AC112220.3-201ENST00000605502 502 ntBASIC0.83□□□□□ -2.28
CCL20P78556 AC108747.1-201ENST00000609508 535 ntBASIC0.83□□□□□ -2.28
CCL20P78556 SNORD33-201ENST00000362761 85 ntBASIC0.82□□□□□ -2.28
CCL20P78556 RNU6-960P-201ENST00000364056 120 ntBASIC0.82□□□□□ -2.28
CCL20P78556 SNORA4.1-201ENST00000364263 144 ntBASIC0.82□□□□□ -2.28
CCL20P78556 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
CCL20P78556 Y_RNA.332-201ENST00000365271 113 ntBASIC0.82□□□□□ -2.28
CCL20P78556 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.82□□□□□ -2.28
CCL20P78556 RPL23AP32-201ENST00000395315 459 ntBASIC0.82□□□□□ -2.28
CCL20P78556 RNU4-22P-201ENST00000411058 166 ntBASIC0.82□□□□□ -2.28
CCL20P78556 AL022238.1-201ENST00000442557 355 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms