Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TIMM9P1-201ENST00000436122 256 ntBASIC0.23□□□□□ -2.37
UBA52P62987 NDUFA5P7-201ENST00000452914 242 ntBASIC0.23□□□□□ -2.37
UBA52P62987 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.23□□□□□ -2.37
UBA52P62987 HMGN1P10-201ENST00000474557 553 ntBASIC0.23□□□□□ -2.37
UBA52P62987 MTCO1P31-201ENST00000506355 492 ntBASIC0.23□□□□□ -2.37
UBA52P62987 AC010460.2-201ENST00000509054 677 ntBASIC0.23□□□□□ -2.37
UBA52P62987 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.23□□□□□ -2.37
UBA52P62987 SNORA3.4-201ENST00000515969 96 ntBASIC0.23□□□□□ -2.37
UBA52P62987 RNA5SP168-201ENST00000516642 112 ntBASIC0.23□□□□□ -2.37
UBA52P62987 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.23□□□□□ -2.37
UBA52P62987 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.23□□□□□ -2.37
UBA52P62987 AC087897.1-201ENST00000550134 156 ntBASIC0.23□□□□□ -2.37
UBA52P62987 AL355598.1-201ENST00000604169 202 ntBASIC0.23□□□□□ -2.37
UBA52P62987 KATNBL1P5-201ENST00000605015 517 ntBASIC0.23□□□□□ -2.37
UBA52P62987 AC098614.4-201ENST00000607601 462 ntBASIC0.23□□□□□ -2.37
UBA52P62987 RNU6-91P-201ENST00000607774 107 ntBASIC0.23□□□□□ -2.37
UBA52P62987 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.23□□□□□ -2.37
UBA52P62987 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.23□□□□□ -2.37
UBA52P62987 FARSBP1-201ENST00000435808 1778 ntBASIC0.23□□□□□ -2.37
UBA52P62987 RNU6-658P-201ENST00000384606 106 ntBASIC0.22□□□□□ -2.37
UBA52P62987 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.22□□□□□ -2.37
UBA52P62987 AC019178.2-201ENST00000423595 505 ntBASIC0.22□□□□□ -2.37
UBA52P62987 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UBA52P62987 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.22□□□□□ -2.37
UBA52P62987 MTCO3P17-201ENST00000443775 513 ntBASIC0.22□□□□□ -2.37
UBA52P62987 AL096829.2-201ENST00000446582 742 ntBASIC0.22□□□□□ -2.37
UBA52P62987 AL050341.1-201ENST00000447743 313 ntBASIC0.22□□□□□ -2.37
UBA52P62987 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UBA52P62987 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
UBA52P62987 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.22□□□□□ -2.37
UBA52P62987 MTCYBP43-201ENST00000513621 740 ntBASIC0.22□□□□□ -2.37
UBA52P62987 SNORA70.22-201ENST00000517160 124 ntBASIC0.22□□□□□ -2.37
UBA52P62987 RNU6-165P-201ENST00000517170 99 ntBASIC0.22□□□□□ -2.37
UBA52P62987 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.22□□□□□ -2.37
UBA52P62987 AC136619.2-201ENST00000563361 631 ntBASIC0.22□□□□□ -2.37
UBA52P62987 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.22□□□□□ -2.37
UBA52P62987 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
UBA52P62987 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.22□□□□□ -2.37
UBA52P62987 AL365434.2-201ENST00000607979 234 ntBASIC0.22□□□□□ -2.37
UBA52P62987 AL590240.4-201ENST00000616908 390 ntBASIC0.22□□□□□ -2.37
UBA52P62987 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.22□□□□□ -2.37
UBA52P62987 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.21□□□□□ -2.38
UBA52P62987 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
UBA52P62987 Y_RNA.245-201ENST00000364493 95 ntBASIC0.21□□□□□ -2.38
UBA52P62987 MIR194-1-201ENST00000384892 85 ntBASIC0.21□□□□□ -2.38
UBA52P62987 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.21□□□□□ -2.38
UBA52P62987 MTND2P5-201ENST00000432656 1006 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AC000111.3-201ENST00000433478 193 ntBASIC0.21□□□□□ -2.38
UBA52P62987 HSPE1P9-201ENST00000440046 311 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AL929288.2-201ENST00000446368 407 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.21□□□□□ -2.38
UBA52P62987 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
UBA52P62987 RNA5SP503-201ENST00000517047 117 ntBASIC0.21□□□□□ -2.38
UBA52P62987 RNU6-889P-201ENST00000517189 103 ntBASIC0.21□□□□□ -2.38
UBA52P62987 RNU6-840P-201ENST00000517275 65 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AC036111.3-201ENST00000526389 112 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.21□□□□□ -2.38
UBA52P62987 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.21□□□□□ -2.38
UBA52P62987 AC091489.2-201ENST00000566263 604 ntBASIC0.21□□□□□ -2.38
UBA52P62987 BPTFP1-201ENST00000579209 492 ntBASIC0.21□□□□□ -2.38
UBA52P62987 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
UBA52P62987 BNIP3P24-201ENST00000593398 557 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AC004009.2-201ENST00000623016 728 ntBASIC0.21□□□□□ -2.38
UBA52P62987 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AC068647.2-201ENST00000637380 353 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AC106858.1-201ENST00000637497 429 ntBASIC0.21□□□□□ -2.38
UBA52P62987 AC119674.1-220ENST00000641502 1048 ntBASIC0.21□□□□□ -2.38
UBA52P62987 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
UBA52P62987 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
UBA52P62987 RNU6-252P-201ENST00000363232 107 ntBASIC0.2□□□□□ -2.38
UBA52P62987 RNU6-657P-201ENST00000383904 107 ntBASIC0.2□□□□□ -2.38
UBA52P62987 Y_RNA.412-201ENST00000384001 104 ntBASIC0.2□□□□□ -2.38
UBA52P62987 RNU6-45P-201ENST00000384471 107 ntBASIC0.2□□□□□ -2.38
UBA52P62987 SNORD116-23-201ENST00000384645 92 ntBASIC0.2□□□□□ -2.38
UBA52P62987 MIR200A-201ENST00000384875 90 ntBASIC0.2□□□□□ -2.38
UBA52P62987 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.2□□□□□ -2.38
UBA52P62987 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.2□□□□□ -2.38
UBA52P62987 RPL32P14-201ENST00000463196 378 ntBASIC0.2□□□□□ -2.38
UBA52P62987 AC130509.1-201ENST00000464158 433 ntBASIC0.2□□□□□ -2.38
UBA52P62987 AC098869.1-201ENST00000481627 292 ntBASIC0.2□□□□□ -2.38
UBA52P62987 AC093259.1-201ENST00000509755 300 ntBASIC0.2□□□□□ -2.38
UBA52P62987 RNU5B-3P-201ENST00000516601 115 ntBASIC0.2□□□□□ -2.38
UBA52P62987 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.2□□□□□ -2.38
UBA52P62987 AC018630.3-201ENST00000542637 96 ntBASIC0.2□□□□□ -2.38
UBA52P62987 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.2□□□□□ -2.38
UBA52P62987 AC107952.2-201ENST00000606048 486 ntBASIC0.2□□□□□ -2.38
UBA52P62987 AL158211.4-201ENST00000606988 584 ntBASIC0.2□□□□□ -2.38
UBA52P62987 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
UBA52P62987 AL138726.1-201ENST00000614873 333 ntBASIC0.2□□□□□ -2.38
UBA52P62987 MIR6134-201ENST00000617606 109 ntBASIC0.2□□□□□ -2.38
UBA52P62987 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
UBA52P62987 Y_RNA.124-201ENST00000363339 93 ntBASIC0.19□□□□□ -2.38
UBA52P62987 RNU6-288P-201ENST00000363690 104 ntBASIC0.19□□□□□ -2.38
UBA52P62987 RNU6-944P-201ENST00000364023 107 ntBASIC0.19□□□□□ -2.38
UBA52P62987 SNORD114-6-201ENST00000364393 72 ntBASIC0.19□□□□□ -2.38
UBA52P62987 RAC1P8-201ENST00000427086 527 ntBASIC0.19□□□□□ -2.38
UBA52P62987 AC008628.1-201ENST00000508663 265 ntBASIC0.19□□□□□ -2.38
UBA52P62987 MTCYBP40-201ENST00000509390 1135 ntBASIC0.19□□□□□ -2.38
UBA52P62987 RNA5SP437-201ENST00000517249 129 ntBASIC0.19□□□□□ -2.38
UBA52P62987 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms