Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR4513-201ENST00000581077 86 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 AL158827.2-201ENST00000602494 330 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 AC124312.5-201ENST00000604451 268 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 MIR1244-1-201ENST00000612829 85 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 U4.1-201ENST00000620349 87 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.82□□□□□ -1.8
HERVK_113P62684 AL691447.3-201ENST00000635020 330 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 MIR1244-3-201ENST00000635744 85 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 MIR1244-2-201ENST00000636449 85 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 MIR1244-4-202ENST00000636813 85 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERVK_113P62684 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.81□□□□□ -1.8
HERVK_113P62684 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.81□□□□□ -1.8
HERVK_113P62684 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HERVK_113P62684 RNU6-428P-201ENST00000362942 107 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 RNU5E-7P-201ENST00000365290 117 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HERVK_113P62684 RNU6-823P-201ENST00000391042 103 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AL591034.2-201ENST00000402839 359 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AL117339.3-201ENST00000418733 162 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.81□□□□□ -1.8
HERVK_113P62684 AL357552.1-201ENST00000445254 415 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 OR2AQ1P-201ENST00000451972 200 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AC021205.2-201ENST00000480069 347 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.81□□□□□ -1.8
HERVK_113P62684 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.81□□□□□ -1.8
HERVK_113P62684 RNU6-377P-201ENST00000515965 102 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 RNU6-475P-201ENST00000516073 104 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AC109479.2-201ENST00000517842 174 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AP005902.1-201ENST00000521358 186 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.81□□□□□ -1.8
HERVK_113P62684 AL161670.1-201ENST00000554348 137 ntBASIC3.81□□□□□ -1.8
HERVK_113P62684 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.81□□□□□ -1.8
HERVK_113P62684 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HERVK_113P62684 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HERVK_113P62684 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HERVK_113P62684 AF127577.6-201ENST00000623352 2191 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.8□□□□□ -1.8
HERVK_113P62684 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HERVK_113P62684 SNORA80A-201ENST00000363922 136 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 SET-203ENST00000372688 801 ntTSL 2 BASIC3.8□□□□□ -1.8
HERVK_113P62684 DEFB109C-201ENST00000382575 264 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 DEFB109B-201ENST00000382656 264 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 Y_RNA.574-201ENST00000384766 95 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 AL138885.1-201ENST00000405921 675 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 AC092423.1-201ENST00000430165 186 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.8□□□□□ -1.8
HERVK_113P62684 HMGN2P16-201ENST00000456802 261 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 RN7SL863P-201ENST00000462370 296 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 SNRPGP3-201ENST00000469405 227 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 MRPS35P2-201ENST00000508242 191 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.8□□□□□ -1.8
HERVK_113P62684 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.8□□□□□ -1.8
HERVK_113P62684 AC110588.1-201ENST00000559699 137 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 MIR4782-201ENST00000577987 79 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.8□□□□□ -1.8
HERVK_113P62684 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.8□□□□□ -1.8
HERVK_113P62684 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.8□□□□□ -1.8
HERVK_113P62684 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.8□□□□□ -1.8
HERVK_113P62684 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.8□□□□□ -1.8
HERVK_113P62684 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HERVK_113P62684 AC008669.1-201ENST00000565823 2178 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERVK_113P62684 FTLP6-201ENST00000355274 422 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 Y_RNA.193-201ENST00000363979 102 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 RNU6-702P-201ENST00000364982 107 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 SNORD14.1-201ENST00000365609 90 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 MIR625-201ENST00000385047 85 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 RNA5SP31-201ENST00000411144 127 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.79□□□□□ -1.8
HERVK_113P62684 AL353705.1-201ENST00000433468 480 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 NDUFB4P6-201ENST00000436819 366 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 CHEK2P4-201ENST00000450340 246 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.79□□□□□ -1.8
HERVK_113P62684 AC112492.4-201ENST00000456549 352 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 AC097462.2-201ENST00000504623 481 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.79□□□□□ -1.8
HERVK_113P62684 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.79□□□□□ -1.8
HERVK_113P62684 SNORA70.19-201ENST00000516717 90 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 RNA5SP468-201ENST00000516782 93 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 RNU6-612P-201ENST00000516909 102 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 RNU7-4P-201ENST00000516961 62 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.79□□□□□ -1.8
HERVK_113P62684 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.79□□□□□ -1.8
HERVK_113P62684 MIR4644-201ENST00000579929 84 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.79□□□□□ -1.8
HERVK_113P62684 MIR8076-201ENST00000611401 83 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 AC090617.7-201ENST00000623952 126 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 MIR4272-201ENST00000635924 64 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.79□□□□□ -1.8
HERVK_113P62684 MTND5P9-201ENST00000503854 1755 ntBASIC3.79□□□□□ -1.8
HERVK_113P62684 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HERVK_113P62684 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HERVK_113P62684 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
HERVK_113P62684 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HERVK_113P62684 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.78□□□□□ -1.8
HERVK_113P62684 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HERVK_113P62684 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HERVK_113P62684 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms