Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 ZNF519P1-201ENST00000449011 1626 ntBASIC3.33□□□□□ -1.88
EIF4A1P60842 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
EIF4A1P60842 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EIF4A1P60842 AC022336.2-201ENST00000568966 2538 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.32□□□□□ -1.88
EIF4A1P60842 RNU6-128P-201ENST00000383976 107 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 RNU6-166P-201ENST00000384371 107 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 MIR27B-201ENST00000385129 97 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 Y_RNA.623-201ENST00000411128 95 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 AL139396.1-201ENST00000421137 167 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 AC007560.1-201ENST00000426912 237 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 AL359672.1-201ENST00000442302 409 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 BRK1P2-201ENST00000442875 223 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.32□□□□□ -1.88
EIF4A1P60842 NDUFB1P2-201ENST00000449477 176 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 AC107399.1-201ENST00000451226 265 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.32□□□□□ -1.88
EIF4A1P60842 SRIP1-201ENST00000489235 288 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 MTND5P5-201ENST00000503764 376 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 RNU6-928P-201ENST00000516876 104 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.32□□□□□ -1.88
EIF4A1P60842 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.32□□□□□ -1.88
EIF4A1P60842 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.32□□□□□ -1.88
EIF4A1P60842 HMGB1P14-201ENST00000557424 591 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 AC016727.1-205ENST00000605437 569 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 RNU6-85P-201ENST00000605989 107 ntBASIC3.32□□□□□ -1.88
EIF4A1P60842 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.32□□□□□ -1.88
EIF4A1P60842 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.32□□□□□ -1.88
EIF4A1P60842 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
EIF4A1P60842 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
EIF4A1P60842 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.32□□□□□ -1.88
EIF4A1P60842 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
EIF4A1P60842 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
EIF4A1P60842 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
EIF4A1P60842 RNU6-562P-201ENST00000362731 107 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 Y_RNA.384-201ENST00000383909 102 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
EIF4A1P60842 AL445529.1-201ENST00000398713 389 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 RN7SKP158-201ENST00000410453 326 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 RNU4-14P-201ENST00000410858 122 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 AC074085.1-201ENST00000413598 418 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.31□□□□□ -1.88
EIF4A1P60842 RPL7P37-201ENST00000425095 738 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 AC098614.2-201ENST00000426040 255 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.31□□□□□ -1.88
EIF4A1P60842 AL627311.1-201ENST00000431514 115 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 RPS3AP52-201ENST00000435639 297 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.31□□□□□ -1.88
EIF4A1P60842 AL078601.1-201ENST00000444542 271 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 MTND1P17-201ENST00000448961 204 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 AC092798.1-201ENST00000458542 409 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 Y_RNA.632-201ENST00000459189 102 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.31□□□□□ -1.88
EIF4A1P60842 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.31□□□□□ -1.88
EIF4A1P60842 AP005597.4-201ENST00000526762 229 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 AMZ2P1-203ENST00000565833 850 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 AC007151.1-201ENST00000572774 483 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
EIF4A1P60842 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.31□□□□□ -1.88
EIF4A1P60842 AL356055.1-201ENST00000602528 446 ntBASIC3.31□□□□□ -1.88
EIF4A1P60842 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.31□□□□□ -1.88
EIF4A1P60842 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.31□□□□□ -1.88
EIF4A1P60842 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
EIF4A1P60842 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EIF4A1P60842 RNU6-270P-201ENST00000364131 105 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 SNORA14A-201ENST00000364773 135 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EIF4A1P60842 Y_RNA.387-201ENST00000383918 102 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 RNU6-1035P-201ENST00000384477 107 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 RNA5SP252-201ENST00000391131 119 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.3□□□□□ -1.88
EIF4A1P60842 AL590632.1-201ENST00000424289 371 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 MTND1P14-201ENST00000427400 950 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 SNAP23P1-201ENST00000433229 246 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 AC244505.4-201ENST00000434905 287 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 SSXP5-201ENST00000443473 287 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 AL031183.1-201ENST00000457667 207 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 Y_RNA.635-201ENST00000459041 101 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.3□□□□□ -1.88
EIF4A1P60842 RPL39P5-202ENST00000512505 151 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 RN7SKP24-201ENST00000515888 284 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
EIF4A1P60842 AP000867.2-201ENST00000532468 320 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.3□□□□□ -1.88
EIF4A1P60842 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.3□□□□□ -1.88
EIF4A1P60842 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.3□□□□□ -1.88
EIF4A1P60842 AC123912.5-201ENST00000605470 343 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 AL050343.2-201ENST00000607338 280 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.3□□□□□ -1.88
EIF4A1P60842 U2.21-201ENST00000637295 81 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EIF4A1P60842 AC233263.6-201ENST00000631132 1963 ntBASIC3.3□□□□□ -1.88
EIF4A1P60842 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.3□□□□□ -1.88
EIF4A1P60842 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
EIF4A1P60842 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
EIF4A1P60842 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
EIF4A1P60842 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms