Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SNORA20.2-201ENST00000383922 131 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AL031577.2-201ENST00000404133 280 ntBASIC1.65□□□□□ -2.15
VSX2P58304 MIR1302-8-201ENST00000408342 128 ntBASIC1.65□□□□□ -2.15
VSX2P58304 Y_RNA.598-201ENST00000410480 95 ntBASIC1.65□□□□□ -2.15
VSX2P58304 RNA5SP111-201ENST00000411386 101 ntBASIC1.65□□□□□ -2.15
VSX2P58304 MTND2P9-201ENST00000422293 931 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.65□□□□□ -2.15
VSX2P58304 MED13P1-201ENST00000428342 171 ntBASIC1.65□□□□□ -2.15
VSX2P58304 RPS24P1-201ENST00000438550 371 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AL353689.1-201ENST00000438895 199 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AC117503.1-201ENST00000472241 394 ntBASIC1.65□□□□□ -2.15
VSX2P58304 HMGB1P30-201ENST00000492455 606 ntBASIC1.65□□□□□ -2.15
VSX2P58304 MTND3P25-201ENST00000509243 135 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AC117522.1-201ENST00000509821 380 ntBASIC1.65□□□□□ -2.15
VSX2P58304 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
VSX2P58304 RNU6-232P-201ENST00000517144 64 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.65□□□□□ -2.15
VSX2P58304 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.65□□□□□ -2.15
VSX2P58304 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.65□□□□□ -2.15
VSX2P58304 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
VSX2P58304 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AC073410.2-201ENST00000603240 332 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AC005034.5-201ENST00000604219 466 ntBASIC1.65□□□□□ -2.15
VSX2P58304 ELOCP5-201ENST00000604924 333 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AL133173.2-201ENST00000614270 90 ntBASIC1.65□□□□□ -2.15
VSX2P58304 uc_338.15-201ENST00000615470 191 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AL603839.4-201ENST00000624658 1005 ntBASIC1.65□□□□□ -2.15
VSX2P58304 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.65□□□□□ -2.15
VSX2P58304 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.65□□□□□ -2.15
VSX2P58304 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VSX2P58304 RNU6-1010P-201ENST00000362757 107 ntBASIC1.64□□□□□ -2.15
VSX2P58304 RNU6-553P-201ENST00000364047 96 ntBASIC1.64□□□□□ -2.15
VSX2P58304 U3.13-201ENST00000364804 214 ntBASIC1.64□□□□□ -2.15
VSX2P58304 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
VSX2P58304 AC074117.2-201ENST00000417130 397 ntBASIC1.64□□□□□ -2.15
VSX2P58304 Z99497.1-201ENST00000421282 135 ntBASIC1.64□□□□□ -2.15
VSX2P58304 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.64□□□□□ -2.15
VSX2P58304 MTND2P4-201ENST00000445034 1004 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.64□□□□□ -2.15
VSX2P58304 BZW1P2-201ENST00000473537 826 ntBASIC1.64□□□□□ -2.15
VSX2P58304 RPL30P6-201ENST00000475925 342 ntBASIC1.64□□□□□ -2.15
VSX2P58304 SNORA43.2-201ENST00000516652 128 ntBASIC1.64□□□□□ -2.15
VSX2P58304 SNORA48.11-201ENST00000517015 89 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AC090572.1-201ENST00000519251 160 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AC034114.1-201ENST00000520293 285 ntBASIC1.64□□□□□ -2.15
VSX2P58304 CYCSP27-201ENST00000527643 293 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.64□□□□□ -2.15
VSX2P58304 AC073539.2-201ENST00000597113 165 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AL031274.2-201ENST00000599419 203 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AP000942.3-201ENST00000603702 160 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AC096772.1-201ENST00000609146 564 ntBASIC1.64□□□□□ -2.15
VSX2P58304 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.64□□□□□ -2.15
VSX2P58304 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.64□□□□□ -2.15
VSX2P58304 RMST_7.1-201ENST00000621935 268 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AC079248.2-201ENST00000623779 326 ntBASIC1.64□□□□□ -2.15
VSX2P58304 AC019226.2-201ENST00000625973 424 ntBASIC1.64□□□□□ -2.15
VSX2P58304 MIR3529-201ENST00000637713 78 ntBASIC1.64□□□□□ -2.15
VSX2P58304 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
VSX2P58304 ZNF702P-202ENST00000434269 1966 ntBASIC1.63□□□□□ -2.15
VSX2P58304 Y_RNA.140-201ENST00000363474 103 ntBASIC1.63□□□□□ -2.15
VSX2P58304 RNY4P34-201ENST00000364779 95 ntBASIC1.63□□□□□ -2.15
VSX2P58304 Y_RNA.576-201ENST00000384781 102 ntBASIC1.63□□□□□ -2.15
VSX2P58304 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
VSX2P58304 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.63□□□□□ -2.15
VSX2P58304 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.63□□□□□ -2.15
VSX2P58304 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.63□□□□□ -2.15
VSX2P58304 MTCO3P5-201ENST00000433620 714 ntBASIC1.63□□□□□ -2.15
VSX2P58304 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.63□□□□□ -2.15
VSX2P58304 AL353752.1-201ENST00000454946 260 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.63□□□□□ -2.15
VSX2P58304 RPL30P12-201ENST00000474666 353 ntBASIC1.63□□□□□ -2.15
VSX2P58304 MTCO3P9-201ENST00000506989 781 ntBASIC1.63□□□□□ -2.15
VSX2P58304 RNU6-586P-201ENST00000517265 104 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.63□□□□□ -2.15
VSX2P58304 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.63□□□□□ -2.15
VSX2P58304 AC106038.2-201ENST00000520706 568 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.63□□□□□ -2.15
VSX2P58304 MTATP6P24-201ENST00000576835 677 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
VSX2P58304 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
VSX2P58304 MIR3915-201ENST00000578518 97 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.63□□□□□ -2.15
VSX2P58304 MIR3683-201ENST00000580847 82 ntBASIC1.63□□□□□ -2.15
VSX2P58304 MIR4760-201ENST00000585040 80 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC010928.2-201ENST00000588017 287 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC090578.1-201ENST00000604955 591 ntBASIC1.63□□□□□ -2.15
VSX2P58304 MIR502-201ENST00000606349 86 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC122133.1-201ENST00000613964 233 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC007494.3-201ENST00000624660 743 ntBASIC1.63□□□□□ -2.15
VSX2P58304 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
VSX2P58304 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VSX2P58304 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VSX2P58304 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
VSX2P58304 RNU6-944P-201ENST00000364023 107 ntBASIC1.62□□□□□ -2.15
VSX2P58304 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
VSX2P58304 SNORD115-7-201ENST00000365306 82 ntBASIC1.62□□□□□ -2.15
VSX2P58304 RNU6-1274P-201ENST00000384557 107 ntBASIC1.62□□□□□ -2.15
VSX2P58304 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
VSX2P58304 RPS3AP3-201ENST00000411933 242 ntBASIC1.62□□□□□ -2.15
VSX2P58304 SNORD56-201ENST00000413522 71 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms