Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN20P56880 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CLDN20P56880 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLDN20P56880 RNU6-858P-201ENST00000362436 107 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 RNU6-562P-201ENST00000362731 107 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 MIR23A-201ENST00000385245 73 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 RNU6-1106P-201ENST00000390845 107 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 RNU6-1009P-201ENST00000390996 107 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AL445529.1-201ENST00000398713 389 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC022028.1-201ENST00000412054 408 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 NCOR1P3-201ENST00000420479 303 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 RPL7P37-201ENST00000425095 738 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN20P56880 AL139132.1-201ENST00000431587 344 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 SNAP23P1-201ENST00000433229 246 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.63□□□□□ -1.99
CLDN20P56880 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN20P56880 AL441985.1-201ENST00000457727 251 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN20P56880 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN20P56880 MTCO1P29-201ENST00000496868 288 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC083906.5-201ENST00000503722 328 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC096745.1-201ENST00000509945 370 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC092436.3-201ENST00000511788 257 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 RNU6-507P-201ENST00000516045 100 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 RNU6-273P-201ENST00000516937 96 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 EIF4BP1-201ENST00000554881 351 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN20P56880 AC025253.1-201ENST00000613623 543 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC063943.3-201ENST00000615562 356 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC002064.3-201ENST00000623448 346 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC006386.2-201ENST00000624491 75 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 AC012005.1-201ENST00000624575 75 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 MIR3529-201ENST00000637713 78 ntBASIC2.63□□□□□ -1.99
CLDN20P56880 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN20P56880 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLDN20P56880 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN20P56880 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.63□□□□□ -1.99
CLDN20P56880 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN20P56880 AC099654.7-201ENST00000635788 2127 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 ZNF519P1-201ENST00000449011 1626 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 RNU5E-4P-201ENST00000364931 120 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 RNU6-827P-201ENST00000365553 106 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 SNORD116-20-201ENST00000384529 92 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 RNU6-748P-201ENST00000384648 107 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AL360182.1-201ENST00000397433 468 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 ATG3P1-201ENST00000419507 911 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AL139396.1-201ENST00000421137 167 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AL358075.3-201ENST00000426289 226 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 RPS15AP10-201ENST00000432472 382 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 HMGB1P18-201ENST00000438801 619 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN20P56880 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN20P56880 AMD1P1-201ENST00000457220 922 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 RNU6-1037P-201ENST00000459571 107 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 RPS29P12-201ENST00000460178 152 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AC107626.1-201ENST00000471084 183 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AC103851.1-201ENST00000506833 274 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN20P56880 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN20P56880 RNU5F-8P-201ENST00000515941 111 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 RNA5SP454-201ENST00000517231 127 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN20P56880 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.62□□□□□ -1.99
CLDN20P56880 AC138761.3-201ENST00000579993 334 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN20P56880 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN20P56880 AC091135.1-201ENST00000585943 307 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AL670379.10-201ENST00000604330 253 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AL670379.9-201ENST00000605428 253 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AL121917.1-203ENST00000605534 577 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AC009994.1-201ENST00000606889 253 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AC064836.2-201ENST00000609491 462 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN20P56880 uc_338.15-201ENST00000615470 191 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN20P56880 UCA1.1-201ENST00000620952 75 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AL133216.2-202ENST00000634512 349 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 TPTEP1-208ENST00000636884 213 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AC093010.3-201ENST00000570269 15214 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AL365361.1-201ENST00000566942 3481 ntBASIC2.62□□□□□ -1.99
CLDN20P56880 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN20P56880 AP003122.5-201ENST00000527668 3766 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 HAUS6P2-201ENST00000433254 2404 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLDN20P56880 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLDN20P56880 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN20P56880 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN20P56880 RPL9P7-201ENST00000330965 580 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 Y_RNA.70-201ENST00000362886 110 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 Y_RNA.142-201ENST00000363491 102 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 Y_RNA.184-201ENST00000363884 108 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 RNU6-105P-201ENST00000363909 104 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 SNORA9.2-201ENST00000365361 133 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 RNU6-843P-201ENST00000384454 104 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 AL356432.1-201ENST00000405809 419 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 COTL1P1-201ENST00000422309 375 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 AL645568.3-201ENST00000433683 316 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 OSTCP8-201ENST00000445117 448 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms