Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 Y_RNA.518-201ENST00000384552 113 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 SNORD115-46-201ENST00000390982 71 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AL079342.1-201ENST00000401460 267 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 MRPL35P1-201ENST00000404272 572 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 RNA5SP104-201ENST00000410989 118 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.62□□□□□ -1.83
GFRA1P56159 AC138623.1-201ENST00000418060 216 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AL590135.1-201ENST00000422215 156 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AC019205.3-201ENST00000424573 156 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 TBCAP1-201ENST00000436520 327 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AC096638.1-201ENST00000444678 216 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.62□□□□□ -1.83
GFRA1P56159 AC026402.1-201ENST00000513642 170 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 SNORA31.1-201ENST00000515993 133 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 SNORA31.5-201ENST00000516190 133 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.62□□□□□ -1.83
GFRA1P56159 AC069240.1-201ENST00000548774 375 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.62□□□□□ -1.83
GFRA1P56159 AC106785.1-201ENST00000565935 262 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 MIR5695-201ENST00000579717 85 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 MIR4300-201ENST00000581016 96 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 MIR3128-201ENST00000581957 66 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 SDR42E1P4-201ENST00000620894 481 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 MIR6500-201ENST00000622700 86 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 AL450472.1-202ENST00000637286 180 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA1P56159 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA1P56159 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.62□□□□□ -1.83
GFRA1P56159 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA1P56159 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.61□□□□□ -1.83
GFRA1P56159 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.61□□□□□ -1.83
GFRA1P56159 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.61□□□□□ -1.83
GFRA1P56159 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.61□□□□□ -1.83
GFRA1P56159 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
GFRA1P56159 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.61□□□□□ -1.83
GFRA1P56159 Y_RNA.84-201ENST00000363011 104 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 RNU4-56P-201ENST00000364700 142 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 SNORA20.1-201ENST00000364790 130 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 Y_RNA.562-201ENST00000384695 113 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 MIR10B-201ENST00000385011 110 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 RNA5SP252-201ENST00000391131 119 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GFRA1P56159 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 RNU6-1077P-201ENST00000410506 102 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 AC012306.1-201ENST00000423267 114 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 AL358075.3-201ENST00000426289 226 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 WARS2P1-201ENST00000429678 537 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 snoU13.6-201ENST00000458785 104 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 AC098869.1-201ENST00000481627 292 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.61□□□□□ -1.83
GFRA1P56159 RNU6-1023P-201ENST00000516137 106 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 RNU6-58P-201ENST00000517143 103 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 SNORA31.21-201ENST00000517180 77 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.61□□□□□ -1.83
GFRA1P56159 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.61□□□□□ -1.83
GFRA1P56159 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.61□□□□□ -1.83
GFRA1P56159 AC023824.2-201ENST00000566185 400 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 AC136932.1-201ENST00000574771 208 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 RN7SL703P-201ENST00000578485 302 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 AC011476.5-201ENST00000615594 130 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GFRA1P56159 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
GFRA1P56159 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
GFRA1P56159 Z82217.1-201ENST00000625157 8149 ntBASIC3.61□□□□□ -1.83
GFRA1P56159 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GFRA1P56159 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA1P56159 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.6□□□□□ -1.83
GFRA1P56159 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA1P56159 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA1P56159 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA1P56159 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.6□□□□□ -1.83
GFRA1P56159 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.6□□□□□ -1.83
GFRA1P56159 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA1P56159 RNA5SP388-201ENST00000362584 119 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 SNORD115-8-201ENST00000363856 82 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 SNORD115-38-201ENST00000365037 82 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RNU6-926P-201ENST00000384075 107 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RNU6-318P-201ENST00000384283 103 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RNU6-750P-201ENST00000390946 107 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RNU6-159P-201ENST00000391080 106 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RNU6-1093P-201ENST00000391194 107 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 SNORD12B-201ENST00000410433 91 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RNU6-1203P-201ENST00000410703 110 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RPS26P42-201ENST00000413485 326 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 ARL5AP4-201ENST00000430731 512 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.6□□□□□ -1.83
GFRA1P56159 CEACAMP4-201ENST00000457676 421 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 AC025445.1-201ENST00000502728 300 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RNA5SP54-201ENST00000516951 92 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 YPEL5P3-201ENST00000547227 352 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 AC120057.2-201ENST00000571520 271 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 MIR3136-201ENST00000583498 78 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.6□□□□□ -1.83
GFRA1P56159 RPS15AP11-201ENST00000594193 385 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 AL606490.9-201ENST00000603331 271 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 AC078938.1-201ENST00000620993 318 ntBASIC3.6□□□□□ -1.83
GFRA1P56159 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA1P56159 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms