Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC092436.3-201ENST00000511788 257 ntBASIC3.26□□□□□ -1.89
COPAP53621 RNU1-54P-201ENST00000517181 120 ntBASIC3.26□□□□□ -1.89
COPAP53621 AC104576.1-201ENST00000524225 88 ntBASIC3.26□□□□□ -1.89
COPAP53621 EIF4BP1-201ENST00000554881 351 ntBASIC3.26□□□□□ -1.89
COPAP53621 AP000787.2-201ENST00000604432 568 ntBASIC3.26□□□□□ -1.89
COPAP53621 uc_338.1-201ENST00000612113 180 ntBASIC3.26□□□□□ -1.89
COPAP53621 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
COPAP53621 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
COPAP53621 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
COPAP53621 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
COPAP53621 CDC27P3-201ENST00000635418 1910 ntBASIC3.25□□□□□ -1.89
COPAP53621 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
COPAP53621 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COPAP53621 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
COPAP53621 RNU6-858P-201ENST00000362436 107 ntBASIC3.25□□□□□ -1.89
COPAP53621 U3.6-201ENST00000363622 211 ntBASIC3.25□□□□□ -1.89
COPAP53621 RPL21P3-201ENST00000395517 478 ntBASIC3.25□□□□□ -1.89
COPAP53621 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.25□□□□□ -1.89
COPAP53621 MTCO2P27-201ENST00000420740 428 ntBASIC3.25□□□□□ -1.89
COPAP53621 AL590632.1-201ENST00000424289 371 ntBASIC3.25□□□□□ -1.89
COPAP53621 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.25□□□□□ -1.89
COPAP53621 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.25□□□□□ -1.89
COPAP53621 UBBP3-201ENST00000445497 241 ntBASIC3.25□□□□□ -1.89
COPAP53621 AC146507.2-201ENST00000460608 476 ntBASIC3.25□□□□□ -1.89
COPAP53621 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.25□□□□□ -1.89
COPAP53621 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.25□□□□□ -1.89
COPAP53621 AC116655.1-201ENST00000508324 901 ntBASIC3.25□□□□□ -1.89
COPAP53621 AC109479.2-201ENST00000517842 174 ntBASIC3.25□□□□□ -1.89
COPAP53621 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.25□□□□□ -1.89
COPAP53621 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.25□□□□□ -1.89
COPAP53621 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.25□□□□□ -1.89
COPAP53621 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.25□□□□□ -1.89
COPAP53621 IMMP1LP2-201ENST00000552954 492 ntBASIC3.25□□□□□ -1.89
COPAP53621 FRG2DP-202ENST00000566967 323 ntBASIC3.25□□□□□ -1.89
COPAP53621 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.25□□□□□ -1.89
COPAP53621 ELOCP5-201ENST00000604924 333 ntBASIC3.25□□□□□ -1.89
COPAP53621 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
COPAP53621 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
COPAP53621 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COPAP53621 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COPAP53621 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.24□□□□□ -1.89
COPAP53621 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.24□□□□□ -1.89
COPAP53621 RNU4-76P-201ENST00000364509 141 ntBASIC3.24□□□□□ -1.89
COPAP53621 RNU6-593P-201ENST00000364716 112 ntBASIC3.24□□□□□ -1.89
COPAP53621 Y_RNA.482-201ENST00000384377 111 ntBASIC3.24□□□□□ -1.89
COPAP53621 RNU6-601P-201ENST00000384540 107 ntBASIC3.24□□□□□ -1.89
COPAP53621 RNU6-95P-201ENST00000384697 107 ntBASIC3.24□□□□□ -1.89
COPAP53621 MIR767-201ENST00000390228 109 ntBASIC3.24□□□□□ -1.89
COPAP53621 RNA5SP492-201ENST00000411330 114 ntBASIC3.24□□□□□ -1.89
COPAP53621 MTND1P14-201ENST00000427400 950 ntBASIC3.24□□□□□ -1.89
COPAP53621 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.24□□□□□ -1.89
COPAP53621 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.24□□□□□ -1.89
COPAP53621 AL645568.3-201ENST00000433683 316 ntBASIC3.24□□□□□ -1.89
COPAP53621 CST9LP2-201ENST00000437612 320 ntBASIC3.24□□□□□ -1.89
COPAP53621 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.24□□□□□ -1.89
COPAP53621 AL161651.1-201ENST00000440882 223 ntBASIC3.24□□□□□ -1.89
COPAP53621 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COPAP53621 RN7SL283P-201ENST00000489055 303 ntBASIC3.24□□□□□ -1.89
COPAP53621 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.24□□□□□ -1.89
COPAP53621 RNU6-377P-201ENST00000515965 102 ntBASIC3.24□□□□□ -1.89
COPAP53621 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.24□□□□□ -1.89
COPAP53621 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COPAP53621 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.24□□□□□ -1.89
COPAP53621 AL050343.2-201ENST00000607338 280 ntBASIC3.24□□□□□ -1.89
COPAP53621 MIR6128-201ENST00000615528 109 ntBASIC3.24□□□□□ -1.89
COPAP53621 AC126177.8-201ENST00000618339 1015 ntBASIC3.24□□□□□ -1.89
COPAP53621 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.24□□□□□ -1.89
COPAP53621 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COPAP53621 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.24□□□□□ -1.89
COPAP53621 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
COPAP53621 AC004944.1-201ENST00000517807 3059 ntBASIC3.23□□□□□ -1.89
COPAP53621 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COPAP53621 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COPAP53621 RNU6-78P-201ENST00000362897 107 ntBASIC3.23□□□□□ -1.89
COPAP53621 SNORA7.4-201ENST00000384249 137 ntBASIC3.23□□□□□ -1.89
COPAP53621 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
COPAP53621 FO393413.1-201ENST00000402892 195 ntBASIC3.23□□□□□ -1.89
COPAP53621 RNU4-14P-201ENST00000410858 122 ntBASIC3.23□□□□□ -1.89
COPAP53621 RNU6-370P-201ENST00000411008 104 ntBASIC3.23□□□□□ -1.89
COPAP53621 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.23□□□□□ -1.89
COPAP53621 SNORD19B-201ENST00000459623 84 ntBASIC3.23□□□□□ -1.89
COPAP53621 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.23□□□□□ -1.89
COPAP53621 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.23□□□□□ -1.89
COPAP53621 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.23□□□□□ -1.89
COPAP53621 HPRT1P3-201ENST00000539521 576 ntBASIC3.23□□□□□ -1.89
COPAP53621 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.23□□□□□ -1.89
COPAP53621 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.23□□□□□ -1.89
COPAP53621 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.23□□□□□ -1.89
COPAP53621 AC025281.1-201ENST00000567026 265 ntBASIC3.23□□□□□ -1.89
COPAP53621 AL121917.1-203ENST00000605534 577 ntBASIC3.23□□□□□ -1.89
COPAP53621 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COPAP53621 AC064836.2-201ENST00000609491 462 ntBASIC3.23□□□□□ -1.89
COPAP53621 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
COPAP53621 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
COPAP53621 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COPAP53621 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COPAP53621 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
COPAP53621 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
COPAP53621 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.22□□□□□ -1.89
COPAP53621 SNORD62.1-201ENST00000362541 86 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms