Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 Y_RNA.687-201ENST00000516558 91 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AC069113.1-201ENST00000517763 267 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AP005597.4-201ENST00000526762 229 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCNKAP51800 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCNKAP51800 AC005261.5-201ENST00000596280 355 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-6P-201ENST00000606623 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCNKAP51800 TPTEP1-208ENST00000636884 213 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.78□□□□□ -1.97
CLCNKAP51800 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLCNKAP51800 Y_RNA.212-201ENST00000364177 102 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 Y_RNA.263-201ENST00000364659 114 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 Y_RNA.356-201ENST00000365475 113 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 MIR512-1-201ENST00000384913 84 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 MIR518D-201ENST00000385014 87 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 MIR34A-201ENST00000385130 110 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 RNU2-41P-201ENST00000410991 178 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 RPL19P1-201ENST00000411635 428 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 RPL7P37-201ENST00000425095 738 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC093019.1-201ENST00000443135 252 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.77□□□□□ -1.97
CLCNKAP51800 RNU7-138P-201ENST00000459479 64 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCNKAP51800 RPPH1-2P-201ENST00000516688 293 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC087854.1-201ENST00000519706 414 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC105029.1-201ENST00000520250 669 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 COPS8P3-201ENST00000526024 482 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCNKAP51800 RAB11AP2-201ENST00000545905 639 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC103810.1-201ENST00000579873 453 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC138761.3-201ENST00000579993 334 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.77□□□□□ -1.97
CLCNKAP51800 OR1M4P-201ENST00000589199 287 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC243960.4-201ENST00000600532 288 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC025253.1-201ENST00000613623 543 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AL138726.1-201ENST00000614873 333 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCNKAP51800 RMST_7.1-201ENST00000621935 268 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 Z69720.2-201ENST00000624755 279 ntBASIC2.77□□□□□ -1.97
CLCNKAP51800 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLCNKAP51800 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLCNKAP51800 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLCNKAP51800 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 RNU6-1013P-201ENST00000384180 107 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 RNU6-72P-201ENST00000384285 79 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 Y_RNA.510-201ENST00000384511 114 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 Y_RNA.529-201ENST00000384586 119 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 MIR9-1-201ENST00000385198 89 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AL590632.1-201ENST00000424289 371 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 TOMM20P4-201ENST00000427861 435 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.76□□□□□ -1.97
CLCNKAP51800 HMGB1P18-201ENST00000438801 619 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.76□□□□□ -1.97
CLCNKAP51800 AL359672.1-201ENST00000442302 409 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 RPL32P28-201ENST00000443577 397 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.76□□□□□ -1.97
CLCNKAP51800 BTF3P15-201ENST00000455606 336 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AMD1P1-201ENST00000457220 922 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 MTND4P17-201ENST00000470444 350 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC128713.1-201ENST00000471495 306 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 RPL31P41-201ENST00000477967 372 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AP004217.1-201ENST00000480579 346 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLCNKAP51800 AC113155.1-201ENST00000511141 769 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC008549.1-201ENST00000512900 643 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 Y_RNA.682-201ENST00000516457 100 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLCNKAP51800 AC104576.1-201ENST00000524225 88 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 GTF3AP2-201ENST00000557014 266 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 LINC00933-203ENST00000559812 219 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
CLCNKAP51800 AC023043.2-201ENST00000589678 1026 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC107871.2-201ENST00000612894 502 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC011890.2-201ENST00000613393 294 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 uc_338.15-201ENST00000615470 191 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC104985.2-201ENST00000620598 500 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC138627.2-201ENST00000624202 601 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 SCARNA15.3-201ENST00000626315 122 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 SCARNA4.1-201ENST00000628597 123 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC112487.2-201ENST00000637950 304 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 AC110491.1-201ENST00000562191 2010 ntBASIC2.76□□□□□ -1.97
CLCNKAP51800 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.76□□□□□ -1.97
CLCNKAP51800 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLCNKAP51800 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLCNKAP51800 Y_RNA.135-201ENST00000363439 95 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLCNKAP51800 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLCNKAP51800 RNU2-49P-201ENST00000410666 184 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC023141.4-201ENST00000412031 328 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.75□□□□□ -1.97
CLCNKAP51800 RPS15AP5-201ENST00000436276 388 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCNKAP51800 AL513043.1-201ENST00000439124 535 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 HMGN2P10-201ENST00000448085 265 ntBASIC2.75□□□□□ -1.97
CLCNKAP51800 AL031274.1-201ENST00000450334 232 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms