Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-1135P-201ENST00000411083 103 ntBASIC4.32□□□□□ -1.72
USP11P51784 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.32□□□□□ -1.72
USP11P51784 SNORA71B-202ENST00000439232 272 ntBASIC4.32□□□□□ -1.72
USP11P51784 ANP32BP2-201ENST00000454525 545 ntBASIC4.32□□□□□ -1.72
USP11P51784 snoU109.2-201ENST00000459316 135 ntBASIC4.32□□□□□ -1.72
USP11P51784 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.32□□□□□ -1.72
USP11P51784 RPL23AP75-201ENST00000491601 451 ntBASIC4.32□□□□□ -1.72
USP11P51784 RNY3P16-201ENST00000516338 101 ntBASIC4.32□□□□□ -1.72
USP11P51784 MIR2114-201ENST00000516645 80 ntBASIC4.32□□□□□ -1.72
USP11P51784 AC023632.4-201ENST00000517783 191 ntBASIC4.32□□□□□ -1.72
USP11P51784 AC022695.1-201ENST00000522089 237 ntBASIC4.32□□□□□ -1.72
USP11P51784 ATP5F1P5-201ENST00000526403 760 ntBASIC4.32□□□□□ -1.72
USP11P51784 FAM60BP-201ENST00000578364 658 ntBASIC4.32□□□□□ -1.72
USP11P51784 AC087499.8-201ENST00000578406 226 ntBASIC4.32□□□□□ -1.72
USP11P51784 MIR4423-201ENST00000580922 80 ntBASIC4.32□□□□□ -1.72
USP11P51784 MIR5187-201ENST00000583479 76 ntBASIC4.32□□□□□ -1.72
USP11P51784 AC244505.7-201ENST00000599675 272 ntBASIC4.32□□□□□ -1.72
USP11P51784 AL645944.1-201ENST00000603857 493 ntBASIC4.32□□□□□ -1.72
USP11P51784 AP001485.1-201ENST00000604799 199 ntBASIC4.32□□□□□ -1.72
USP11P51784 SNORA62.6-201ENST00000606322 83 ntBASIC4.32□□□□□ -1.72
USP11P51784 AC091953.5-201ENST00000622919 233 ntBASIC4.32□□□□□ -1.72
USP11P51784 AC099506.2-201ENST00000623074 221 ntBASIC4.32□□□□□ -1.72
USP11P51784 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP11P51784 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP11P51784 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP11P51784 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP11P51784 RNA5SP322-201ENST00000363617 119 ntBASIC4.31□□□□□ -1.72
USP11P51784 Y_RNA.418-201ENST00000384029 102 ntBASIC4.31□□□□□ -1.72
USP11P51784 RNU1-89P-201ENST00000384592 164 ntBASIC4.31□□□□□ -1.72
USP11P51784 Y_RNA.569-201ENST00000384749 103 ntBASIC4.31□□□□□ -1.72
USP11P51784 MIR554-201ENST00000384874 96 ntBASIC4.31□□□□□ -1.72
USP11P51784 RPS4XP3-201ENST00000398541 413 ntBASIC4.31□□□□□ -1.72
USP11P51784 RNU2-61P-201ENST00000411069 191 ntBASIC4.31□□□□□ -1.72
USP11P51784 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.31□□□□□ -1.72
USP11P51784 TOMM20P4-201ENST00000427861 435 ntBASIC4.31□□□□□ -1.72
USP11P51784 AC009296.1-201ENST00000443146 155 ntBASIC4.31□□□□□ -1.72
USP11P51784 AL500522.2-201ENST00000448562 343 ntBASIC4.31□□□□□ -1.72
USP11P51784 Y_RNA.638-201ENST00000459374 113 ntBASIC4.31□□□□□ -1.72
USP11P51784 SNORA31.18-201ENST00000517043 134 ntBASIC4.31□□□□□ -1.72
USP11P51784 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.31□□□□□ -1.72
USP11P51784 SNRPGP15-201ENST00000600149 222 ntBASIC4.31□□□□□ -1.72
USP11P51784 RPL23AP88-201ENST00000605759 454 ntBASIC4.31□□□□□ -1.72
USP11P51784 RNU1-30P-201ENST00000606575 163 ntBASIC4.31□□□□□ -1.72
USP11P51784 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.31□□□□□ -1.72
USP11P51784 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.31□□□□□ -1.72
USP11P51784 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.31□□□□□ -1.72
USP11P51784 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.31□□□□□ -1.72
USP11P51784 AC233981.2-201ENST00000611524 1614 ntBASIC4.31□□□□□ -1.72
USP11P51784 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP11P51784 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
USP11P51784 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.31□□□□□ -1.72
USP11P51784 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP11P51784 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
USP11P51784 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP11P51784 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
USP11P51784 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.3□□□□□ -1.72
USP11P51784 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP11P51784 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.82-201ENST00000363000 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.92-201ENST00000363043 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.235-201ENST00000364412 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.245-201ENST00000364493 95 ntBASIC4.3□□□□□ -1.72
USP11P51784 RNU6-923P-201ENST00000364753 107 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.306-201ENST00000365015 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.312-201ENST00000365089 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.322-201ENST00000365151 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 RNU5E-7P-201ENST00000365290 117 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.590-201ENST00000410140 107 ntBASIC4.3□□□□□ -1.72
USP11P51784 SNORA57.3-201ENST00000411095 141 ntBASIC4.3□□□□□ -1.72
USP11P51784 RPL19P1-201ENST00000411635 428 ntBASIC4.3□□□□□ -1.72
USP11P51784 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.3□□□□□ -1.72
USP11P51784 AC017083.1-201ENST00000428093 483 ntBASIC4.3□□□□□ -1.72
USP11P51784 AP000907.1-201ENST00000428428 510 ntBASIC4.3□□□□□ -1.72
USP11P51784 CYCSP32-201ENST00000440548 321 ntBASIC4.3□□□□□ -1.72
USP11P51784 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.3□□□□□ -1.72
USP11P51784 AC092798.1-201ENST00000458542 409 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.650-201ENST00000459002 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 AL133162.1-201ENST00000463228 453 ntBASIC4.3□□□□□ -1.72
USP11P51784 RPL26P26-201ENST00000480251 434 ntBASIC4.3□□□□□ -1.72
USP11P51784 RPL30P1-201ENST00000488676 339 ntBASIC4.3□□□□□ -1.72
USP11P51784 RAC1P2-201ENST00000511164 579 ntBASIC4.3□□□□□ -1.72
USP11P51784 RNA5SP309-201ENST00000516670 106 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.777-201ENST00000516982 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 SNORA31.20-201ENST00000517111 133 ntBASIC4.3□□□□□ -1.72
USP11P51784 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.3□□□□□ -1.72
USP11P51784 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.3□□□□□ -1.72
USP11P51784 H3F3AP1-201ENST00000559984 334 ntBASIC4.3□□□□□ -1.72
USP11P51784 MIR4782-201ENST00000577987 79 ntBASIC4.3□□□□□ -1.72
USP11P51784 AC020914.4-201ENST00000597690 277 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.771-201ENST00000598668 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 AC006133.1-201ENST00000617106 264 ntBASIC4.3□□□□□ -1.72
USP11P51784 Y_RNA.789-201ENST00000622480 102 ntBASIC4.3□□□□□ -1.72
USP11P51784 SCARNA4-201ENST00000629045 128 ntBASIC4.3□□□□□ -1.72
USP11P51784 FAM35DP-201ENST00000323387 2712 ntBASIC4.3□□□□□ -1.72
USP11P51784 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP11P51784 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.3□□□□□ -1.72
USP11P51784 AC135776.4-201ENST00000624300 1904 ntBASIC4.3□□□□□ -1.72
USP11P51784 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP11P51784 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
USP11P51784 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms