Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 EIF4EP3-201ENST00000498782 656 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 CCDC34P1-201ENST00000507441 517 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 AC107222.1-201ENST00000510899 637 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCC3P46736 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.29□□□□□ -2.04
BRCC3P46736 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCC3P46736 AP000889.2-201ENST00000532684 490 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCC3P46736 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.29□□□□□ -2.04
BRCC3P46736 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCC3P46736 AC008945.2-201ENST00000606056 604 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 AC093788.1-201ENST00000609356 927 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 AL359757.2-201ENST00000624309 274 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 MIR219B-201ENST00000637023 88 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 U6.99-201ENST00000637524 83 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
BRCC3P46736 ADAM3A-203ENST00000461344 2157 ntBASIC2.29□□□□□ -2.04
BRCC3P46736 Y_RNA.38-201ENST00000362617 102 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 Y_RNA.255-201ENST00000364581 97 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 RNU6-395P-201ENST00000365662 106 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 Y_RNA.505-201ENST00000384489 102 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 RNU6-1179P-201ENST00000384667 107 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 MIR504-201ENST00000385065 83 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 SNORA16.2-201ENST00000390991 127 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 AL590002.1-201ENST00000406554 418 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 U3.37-201ENST00000408528 213 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.28□□□□□ -2.04
BRCC3P46736 RNU6-387P-201ENST00000411331 105 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 CYCSP33-201ENST00000414485 327 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 AC016831.2-201ENST00000417179 352 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCC3P46736 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCC3P46736 AC007560.1-201ENST00000426912 237 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.28□□□□□ -2.04
BRCC3P46736 MTND1P4-201ENST00000435196 415 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.28□□□□□ -2.04
BRCC3P46736 RNU7-180P-201ENST00000459240 63 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.28□□□□□ -2.04
BRCC3P46736 RNA5SP401-201ENST00000515920 127 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 RNU6-581P-201ENST00000516214 105 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 RNU6-1178P-201ENST00000516674 107 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 AP003033.1-201ENST00000527244 415 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.28□□□□□ -2.04
BRCC3P46736 HIF1AP1-201ENST00000553642 175 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 LINC00933-203ENST00000559812 219 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 MIR4782-201ENST00000577987 79 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 MIR548AC-201ENST00000585049 88 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 MIR4424-201ENST00000585257 86 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 AL356280.1-201ENST00000603614 379 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.28□□□□□ -2.04
BRCC3P46736 MIR7157-201ENST00000635801 60 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 AC068137.3-201ENST00000639191 341 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 AC073869.6-201ENST00000640656 341 ntBASIC2.28□□□□□ -2.04
BRCC3P46736 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.28□□□□□ -2.04
BRCC3P46736 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.27□□□□□ -2.05
BRCC3P46736 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRCC3P46736 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRCC3P46736 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRCC3P46736 RNU4-20P-201ENST00000365601 151 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 RNU6-898P-201ENST00000365627 104 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
BRCC3P46736 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
BRCC3P46736 RNU2-3P-201ENST00000410144 191 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 RNU6-908P-201ENST00000410160 94 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 RNU6-1068P-201ENST00000410958 103 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.27□□□□□ -2.05
BRCC3P46736 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCC3P46736 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCC3P46736 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.27□□□□□ -2.05
BRCC3P46736 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCC3P46736 snoU109.2-201ENST00000459316 135 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 AL121769.1-201ENST00000469473 401 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.27□□□□□ -2.05
BRCC3P46736 AC011352.1-201ENST00000512300 793 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 SNORA31.6-201ENST00000516241 130 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
BRCC3P46736 HMGB1P33-201ENST00000563485 527 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCC3P46736 AL138976.2-201ENST00000563989 694 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 MIR3117-201ENST00000584034 78 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 AC080078.2-201ENST00000603766 501 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 AL138889.2-201ENST00000603883 242 ntBASIC2.27□□□□□ -2.05
BRCC3P46736 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRCC3P46736 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.26□□□□□ -2.05
BRCC3P46736 MTND5P30-201ENST00000452896 1731 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 SNORD14B-201ENST00000364533 90 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 RNU6-517P-201ENST00000384362 110 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 RNU6-45P-201ENST00000384471 107 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 RNU6-748P-201ENST00000384648 107 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 SNORD70.1-201ENST00000391007 85 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 RNU6-648P-201ENST00000410190 107 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 RNU2-29P-201ENST00000410423 189 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 Y_RNA.619-201ENST00000410951 90 ntBASIC2.26□□□□□ -2.05
BRCC3P46736 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.26□□□□□ -2.05
BRCC3P46736 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.26□□□□□ -2.05
BRCC3P46736 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.26□□□□□ -2.05
BRCC3P46736 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms