Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA4P43681 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA4P43681 RN7SL691P-201ENST00000494487 301 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA4P43681 PPBPP1-201ENST00000510807 373 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 RNA5SP49-201ENST00000516450 115 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 RNU6-1007P-201ENST00000516586 107 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 RN7SKP277-201ENST00000516895 283 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 RNU2-60P-201ENST00000517290 128 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 MTND6P33-201ENST00000571794 183 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 AC136624.4-201ENST00000573044 370 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 MIR4512-201ENST00000583257 77 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 AL391813.1-201ENST00000603098 260 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 AL391903.3-201ENST00000612158 163 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 AC083809.1-201ENST00000615051 472 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 AC013791.1-201ENST00000616619 62 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 AC011944.2-201ENST00000624440 683 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA4P43681 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA4P43681 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA4P43681 AC068700.1-201ENST00000565862 3754 ntBASIC4.3□□□□□ -1.72
CHRNA4P43681 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA4P43681 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CHRNA4P43681 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA4P43681 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA4P43681 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CHRNA4P43681 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA4P43681 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CHRNA4P43681 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA4P43681 RNU1-14P-201ENST00000362759 152 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 RNA5SP28-201ENST00000363841 119 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 SNORD115-8-201ENST00000363856 82 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 RNU1-132P-201ENST00000364300 164 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 RNU4-10P-201ENST00000364383 140 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 SNORD115-38-201ENST00000365037 82 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 Y_RNA.393-201ENST00000383936 102 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 SNORA29-201ENST00000384183 140 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 MIR548A3-201ENST00000385297 97 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 SNORA40C-201ENST00000391285 128 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 SNORA75.5-201ENST00000391291 81 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 HLA-N-201ENST00000437516 135 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA4P43681 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA4P43681 AL121914.1-201ENST00000450188 156 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 RNU6-625P-201ENST00000459412 107 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 RPS26P28-201ENST00000470806 348 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 AC146944.2-203ENST00000502493 354 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 AC139495.1-202ENST00000513164 354 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 RNU6-453P-201ENST00000516819 85 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA4P43681 AL138963.2-201ENST00000605137 226 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 uc_338.28-201ENST00000612082 187 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 AC004467.1-201ENST00000615678 330 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 AC015726.2-201ENST00000620112 122 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 AC091932.3-201ENST00000624223 323 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA4P43681 AC241585.2-209ENST00000638217 143 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.29□□□□□ -1.72
CHRNA4P43681 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA4P43681 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA4P43681 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA4P43681 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CHRNA4P43681 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA4P43681 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA4P43681 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA4P43681 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.28□□□□□ -1.72
CHRNA4P43681 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA4P43681 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CHRNA4P43681 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA4P43681 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA4P43681 MIR15B-201ENST00000385045 98 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 RNU6-882P-201ENST00000391025 103 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 RNU2-54P-201ENST00000410299 190 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 Y_RNA.630-201ENST00000411370 108 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA4P43681 RPL21P66-201ENST00000426566 466 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 AC010095.1-201ENST00000443543 144 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 RPS27P1-201ENST00000450552 247 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 FABP5P15-201ENST00000453566 214 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 RNU6-1198P-201ENST00000516904 67 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 AC016256.1-201ENST00000547971 354 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 AL590392.1-201ENST00000604960 446 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 AL353748.2-201ENST00000622148 471 ntBASIC4.28□□□□□ -1.72
CHRNA4P43681 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA4P43681 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA4P43681 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CHRNA4P43681 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA4P43681 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA4P43681 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
CHRNA4P43681 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA4P43681 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms