Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.12□□□□□ -2.23
CD40LGP29965 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 NDUFB1P2-201ENST00000449477 176 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 RNU1-131P-201ENST00000458943 161 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 RN7SKP210-201ENST00000459176 261 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AC130509.1-201ENST00000464158 433 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.12□□□□□ -2.23
CD40LGP29965 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.12□□□□□ -2.23
CD40LGP29965 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.12□□□□□ -2.23
CD40LGP29965 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.12□□□□□ -2.23
CD40LGP29965 VN1R82P-201ENST00000601481 356 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AL022154.1-201ENST00000604698 785 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 MIR15A-201ENST00000607334 83 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AL355802.3-201ENST00000607571 545 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 MIR8063-201ENST00000621930 81 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AC022513.1-201ENST00000624512 117 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.12□□□□□ -2.23
CD40LGP29965 AC068205.3-201ENST00000636385 468 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 Y_RNA.140-201ENST00000363474 103 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 SNORA62.1-201ENST00000364287 154 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 RNU6-413P-201ENST00000384115 107 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 AC069282.1-201ENST00000411911 526 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 RPL37P10-201ENST00000412884 288 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.11□□□□□ -2.23
CD40LGP29965 AC007327.1-201ENST00000447461 264 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.11□□□□□ -2.23
CD40LGP29965 AC079140.2-201ENST00000506193 142 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.11□□□□□ -2.23
CD40LGP29965 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CD40LGP29965 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.11□□□□□ -2.23
CD40LGP29965 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.11□□□□□ -2.23
CD40LGP29965 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.11□□□□□ -2.23
CD40LGP29965 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.11□□□□□ -2.23
CD40LGP29965 KC877982.1-201ENST00000602313 470 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 AP000654.2-201ENST00000605633 586 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 RNU6-1192P-201ENST00000612197 107 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 RNU6-489P-201ENST00000618289 107 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 AL121895.2-201ENST00000619558 447 ntBASIC1.11□□□□□ -2.23
CD40LGP29965 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 SNORD116-12-201ENST00000384468 92 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 MIR764-201ENST00000390811 85 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 RNU6-360P-201ENST00000390944 104 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 AL357139.1-201ENST00000407792 426 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 RNU6-174P-201ENST00000410406 106 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 ELOCP17-201ENST00000414751 326 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 ELOCP9-201ENST00000418624 239 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.1□□□□□ -2.23
CD40LGP29965 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 MTCYBP5-201ENST00000423752 1135 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.1□□□□□ -2.23
CD40LGP29965 AL365400.1-201ENST00000431854 640 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 FTH1P12-201ENST00000432137 551 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 LARP1BP3-201ENST00000437229 869 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 CALM1P1-201ENST00000442082 433 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.1□□□□□ -2.23
CD40LGP29965 snoU109.2-201ENST00000459316 135 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 MTCYBP18-201ENST00000501056 747 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 AC108078.1-201ENST00000508073 725 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.1□□□□□ -2.23
CD40LGP29965 AP003033.1-201ENST00000527244 415 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 AC023813.2-201ENST00000564321 469 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 AC063943.3-201ENST00000615562 356 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 SCARNA4-202ENST00000625402 129 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.1□□□□□ -2.23
CD40LGP29965 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CD40LGP29965 LINC02555-201ENST00000563933 1951 ntBASIC1.1□□□□□ -2.23
CD40LGP29965 MTND5P9-201ENST00000503854 1755 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
CD40LGP29965 OR4G2P-201ENST00000328113 903 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 MIR378A-201ENST00000362177 66 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.09□□□□□ -2.23
CD40LGP29965 C8orf59P1-201ENST00000429930 303 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.09□□□□□ -2.23
CD40LGP29965 AC006026.2-201ENST00000457376 180 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.09□□□□□ -2.23
CD40LGP29965 AC009646.1-201ENST00000510455 318 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 SNORA19.3-201ENST00000516165 130 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 RNA5SP458-201ENST00000516188 119 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.09□□□□□ -2.23
CD40LGP29965 AL138889.2-201ENST00000603883 242 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 AL355816.2-201ENST00000610049 647 ntBASIC1.09□□□□□ -2.23
CD40LGP29965 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.09□□□□□ -2.23
CD40LGP29965 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.09□□□□□ -2.23
CD40LGP29965 SNORD3E-201ENST00000362899 217 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 Y_RNA.192-201ENST00000363977 102 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 RNU6-457P-201ENST00000363999 107 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 RNA5SP99-201ENST00000364020 114 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 Y_RNA.255-201ENST00000364581 97 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 RNU6-190P-201ENST00000384154 102 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 U8.10-201ENST00000384260 133 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 AC092809.3-201ENST00000415453 231 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 RPL9P9-202ENST00000466501 579 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 AC119751.4-201ENST00000507498 357 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 AC116353.3-201ENST00000511215 249 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 SNORA3.4-201ENST00000515969 96 ntBASIC1.08□□□□□ -2.24
CD40LGP29965 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.08□□□□□ -2.24
CD40LGP29965 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.08□□□□□ -2.24
CD40LGP29965 MIR544B-201ENST00000582372 78 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms