Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR4711-201ENST00000578274 70 ntBASIC0.96□□□□□ -2.26
COL4A5P29400 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.96□□□□□ -2.26
COL4A5P29400 AC099785.1-201ENST00000605697 437 ntBASIC0.96□□□□□ -2.26
COL4A5P29400 AC091304.6-201ENST00000619761 202 ntBASIC0.96□□□□□ -2.26
COL4A5P29400 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.96□□□□□ -2.26
COL4A5P29400 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL4A5P29400 AC100821.1-201ENST00000523153 2479 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 RNU6-343P-201ENST00000364709 104 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 RNU6-546P-201ENST00000383991 107 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AL139397.2-201ENST00000404529 772 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.95□□□□□ -2.26
COL4A5P29400 NCOR1P3-201ENST00000420479 303 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A5P29400 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A5P29400 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A5P29400 AC139453.3-201ENST00000493276 369 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AC096745.1-201ENST00000509945 370 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AC008834.1-201ENST00000511612 175 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 RNA5SP216-201ENST00000516111 123 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AC023538.1-201ENST00000534576 736 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AL136520.1-202ENST00000555494 763 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AL031775.1-201ENST00000607014 887 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 RNU6-1192P-201ENST00000612197 107 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 RNU6-489P-201ENST00000618289 107 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.95□□□□□ -2.26
COL4A5P29400 FRG1KP-201ENST00000623592 341 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AC138627.2-201ENST00000624202 601 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AC091965.5-201ENST00000624785 342 ntBASIC0.95□□□□□ -2.26
COL4A5P29400 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A5P29400 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL4A5P29400 Y_RNA.408-201ENST00000383987 102 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 FTH1P15-201ENST00000406984 280 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.94□□□□□ -2.26
COL4A5P29400 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.94□□□□□ -2.26
COL4A5P29400 USP9YP24-201ENST00000434374 697 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC118469.1-201ENST00000442943 488 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.94□□□□□ -2.26
COL4A5P29400 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.94□□□□□ -2.26
COL4A5P29400 AC068620.3-201ENST00000602749 560 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 CYP2C61P-201ENST00000604072 290 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC107952.2-201ENST00000606048 486 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A5P29400 MIR6134-201ENST00000617606 109 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC007792.1-201ENST00000623023 402 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 SNORA8-201ENST00000384574 139 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
COL4A5P29400 AL353621.1-201ENST00000418219 243 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A5P29400 AL953862.1-201ENST00000423016 168 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 RAC1P6-201ENST00000423911 575 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A5P29400 UBE2V1P4-201ENST00000425374 344 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC093899.1-201ENST00000457984 376 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 RNU6-953P-201ENST00000459154 107 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 RPL7P43-201ENST00000478876 753 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.94□□□□□ -2.26
COL4A5P29400 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL4A5P29400 SNORA31.3-201ENST00000516029 96 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A5P29400 AC009712.1-201ENST00000564938 316 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A5P29400 AC090186.1-201ENST00000605991 572 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 uc_338.15-201ENST00000615470 191 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 AC004808.1-201ENST00000627671 721 ntBASIC0.94□□□□□ -2.26
COL4A5P29400 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL4A5P29400 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL4A5P29400 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL4A5P29400 RNU1-58P-201ENST00000362413 163 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 RNA5SP499-201ENST00000363982 119 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 MIR508-201ENST00000384857 115 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 MIR19A-201ENST00000384878 82 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 MIR301A-201ENST00000385261 86 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 SNORA40C-201ENST00000391285 128 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 RNU2-62P-201ENST00000410868 191 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.93□□□□□ -2.26
COL4A5P29400 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.93□□□□□ -2.26
COL4A5P29400 AL022238.1-201ENST00000442557 355 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 AC007327.1-201ENST00000447461 264 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.93□□□□□ -2.26
COL4A5P29400 AC108729.1-201ENST00000487812 947 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.93□□□□□ -2.26
COL4A5P29400 AC079395.1-201ENST00000510981 262 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 AC010376.1-201ENST00000522101 334 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 AC004812.1-201ENST00000540773 146 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 AC133485.1-201ENST00000567176 124 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 AC138907.6-201ENST00000568401 126 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.93□□□□□ -2.26
COL4A5P29400 AC022202.1-201ENST00000613515 211 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 AC090517.3-201ENST00000625170 141 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.93□□□□□ -2.26
COL4A5P29400 MTND5P33-201ENST00000571250 1450 ntBASIC0.93□□□□□ -2.26
COL4A5P29400 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 OR4G2P-201ENST00000328113 903 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 AL591034.2-201ENST00000402839 359 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 RNU2-72P-201ENST00000411175 163 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A5P29400 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A5P29400 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.92□□□□□ -2.26
COL4A5P29400 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms