Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 RNA5SP503-201ENST00000517047 117 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AC022616.8-201ENST00000533569 253 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 MIR4298-201ENST00000584380 73 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 SEPT7P9-203ENST00000604116 343 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AL136363.2-201ENST00000604173 851 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 AC008555.8-201ENST00000623602 2168 ntBASIC2.16□□□□□ -2.06
HLA-DPA1P20036 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DPA1P20036 Y_RNA.169-201ENST00000363745 96 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 RNU6-715P-201ENST00000365204 103 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AL353689.1-201ENST00000438895 199 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC007969.2-201ENST00000441891 191 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC079448.1-201ENST00000449377 373 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 MTND2P33-201ENST00000506452 1031 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC117532.1-201ENST00000514638 323 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 SNORD27.1-201ENST00000516319 72 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 RNU6-965P-201ENST00000516721 96 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 Y_RNA.717-201ENST00000517106 92 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 MIR3945-201ENST00000581853 98 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC091135.1-201ENST00000585943 307 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC008749.1-201ENST00000597650 306 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AC006566.1-201ENST00000608943 513 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 AL132822.1-201ENST00000617063 513 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 Z69720.2-201ENST00000624755 279 ntBASIC2.15□□□□□ -2.07
HLA-DPA1P20036 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DPA1P20036 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 RNU4-91P-201ENST00000364778 135 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 Y_RNA.324-201ENST00000365165 102 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 MIR544A-201ENST00000384855 91 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 MIR29C-201ENST00000385231 88 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 DPH3P2-201ENST00000422618 250 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AL596276.1-201ENST00000434465 418 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC096638.1-201ENST00000444678 216 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC245102.2-201ENST00000448956 180 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AL122001.1-201ENST00000457027 370 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 PRELID3BP1-201ENST00000457142 540 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 RPS29P15-201ENST00000458329 171 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC010486.2-201ENST00000505572 483 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC107222.1-201ENST00000510899 637 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 MIR514B-201ENST00000516774 80 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC012414.6-201ENST00000568241 401 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC243960.4-201ENST00000600532 288 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC063943.3-201ENST00000615562 356 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AL359314.1-201ENST00000616913 261 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 AC097372.5-201ENST00000623665 376 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 U4.7-201ENST00000638126 106 ntBASIC2.14□□□□□ -2.07
HLA-DPA1P20036 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
HLA-DPA1P20036 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 RNU6-1029P-201ENST00000384109 107 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 MIR676-201ENST00000390702 67 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 MIR1262-201ENST00000408276 93 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 HMGB3P2-201ENST00000411913 584 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 USP9YP27-201ENST00000418455 438 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 AP001893.2-201ENST00000526949 202 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 MIR4299-201ENST00000577899 72 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 AC005034.5-201ENST00000604219 466 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 AC008945.2-201ENST00000606056 604 ntBASIC2.13□□□□□ -2.07
HLA-DPA1P20036 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DPA1P20036 RNU6-37P-201ENST00000362692 107 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms