Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.09□□□□□ -2.42
HMGA1P17096 RNY1P8-201ENST00000383970 114 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 USP9YP19-201ENST00000412165 485 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 USP9YP13-201ENST00000417797 480 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 AL035398.1-201ENST00000430869 322 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGA1P17096 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGA1P17096 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGA1P17096 SNORA31.2-201ENST00000516019 134 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 RNU6-586P-201ENST00000517265 104 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGA1P17096 MIR5094-201ENST00000578766 85 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 AC091805.2-201ENST00000603848 235 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 AL162730.1-201ENST00000605734 292 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 AL355802.4-201ENST00000607635 548 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 AC126177.8-201ENST00000618339 1015 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.1□□□□□ -2.43
HMGA1P17096 RNU2-33P-201ENST00000410344 192 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 SKA2P1-201ENST00000425592 390 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.11□□□□□ -2.43
HMGA1P17096 PTGES3P1-201ENST00000439531 483 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 DAP3P1-201ENST00000441522 278 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 MTND2P4-201ENST00000445034 1004 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 AL031313.1-201ENST00000448435 256 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-0.11□□□□□ -2.43
HMGA1P17096 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.11□□□□□ -2.43
HMGA1P17096 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC-0.11□□□□□ -2.43
HMGA1P17096 HMGB1P33-201ENST00000563485 527 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.11□□□□□ -2.43
HMGA1P17096 AC011939.3-201ENST00000613686 466 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 AC107075.1-201ENST00000613695 314 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 AC130324.3-201ENST00000614165 542 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 AC100810.6-201ENST00000638068 285 ntBASIC-0.11□□□□□ -2.43
HMGA1P17096 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC-0.12□□□□□ -2.43
HMGA1P17096 SNORA36.2-201ENST00000384004 127 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 RNU6-418P-201ENST00000384035 107 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 RNU6-296P-201ENST00000384608 107 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
HMGA1P17096 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGA1P17096 RPP40P1-201ENST00000426762 456 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGA1P17096 MTCO2P25-201ENST00000447065 681 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 RNU6-965P-201ENST00000516721 96 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 RNU6-165P-201ENST00000517170 99 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 CR383656.7-201ENST00000548164 174 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 AL136520.1-202ENST00000555494 763 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 AC120349.3-201ENST00000624377 529 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.12□□□□□ -2.43
HMGA1P17096 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
HMGA1P17096 MTND5P31-201ENST00000419366 1374 ntBASIC-0.12□□□□□ -2.43
HMGA1P17096 RNU4-79P-201ENST00000362764 141 ntBASIC-0.13□□□□□ -2.43
HMGA1P17096 RNA5SP264-201ENST00000363115 107 ntBASIC-0.13□□□□□ -2.43
HMGA1P17096 SNORD89-201ENST00000390981 114 ntBASIC-0.13□□□□□ -2.43
HMGA1P17096 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.13□□□□□ -2.43
HMGA1P17096 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.13□□□□□ -2.43
HMGA1P17096 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.13□□□□□ -2.43
HMGA1P17096 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.13□□□□□ -2.43
HMGA1P17096 AC130509.1-201ENST00000464158 433 ntBASIC-0.13□□□□□ -2.43
HMGA1P17096 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.13□□□□□ -2.43
HMGA1P17096 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.13□□□□□ -2.43
HMGA1P17096 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.13□□□□□ -2.43
HMGA1P17096 MIR4305-201ENST00000583252 102 ntBASIC-0.13□□□□□ -2.43
HMGA1P17096 AL590240.4-201ENST00000616908 390 ntBASIC-0.13□□□□□ -2.43
HMGA1P17096 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.13□□□□□ -2.43
HMGA1P17096 MIR103A1-201ENST00000362165 78 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 RNU2-15P-201ENST00000410692 191 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 RNA5SP111-201ENST00000411386 101 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AC019070.1-201ENST00000415008 1024 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGA1P17096 FO393419.3-201ENST00000428741 282 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGA1P17096 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGA1P17096 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.14□□□□□ -2.43
HMGA1P17096 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGA1P17096 AC233266.1-201ENST00000454518 96 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.14□□□□□ -2.43
HMGA1P17096 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AC105758.1-201ENST00000506038 399 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGA1P17096 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.14□□□□□ -2.43
HMGA1P17096 AC107304.1-201ENST00000604229 296 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AC242852.1-201ENST00000612151 96 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AC002550.2-201ENST00000621246 394 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AC244015.1-201ENST00000622301 99 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AC093648.1-201ENST00000623546 606 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 AP003400.6-201ENST00000624698 740 ntBASIC-0.14□□□□□ -2.43
HMGA1P17096 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
HMGA1P17096 RNU6V-201ENST00000384105 107 ntBASIC-0.15□□□□□ -2.43
HMGA1P17096 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.15□□□□□ -2.43
HMGA1P17096 RPS3AP36-201ENST00000398190 775 ntBASIC-0.15□□□□□ -2.43
HMGA1P17096 SNORD99-201ENST00000408612 74 ntBASIC-0.15□□□□□ -2.43
HMGA1P17096 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.15□□□□□ -2.43
HMGA1P17096 MTND4P20-201ENST00000424125 869 ntBASIC-0.15□□□□□ -2.43
HMGA1P17096 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.15□□□□□ -2.43
HMGA1P17096 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC-0.15□□□□□ -2.43
HMGA1P17096 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.15□□□□□ -2.43
HMGA1P17096 AC048334.1-201ENST00000477975 159 ntBASIC-0.15□□□□□ -2.43
HMGA1P17096 AC005741.1-201ENST00000511094 432 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms