Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC073346.2-201ENST00000624724 2058 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 RNU6-1188P-201ENST00000363795 107 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 RNU6-1011P-201ENST00000384668 107 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 MIR517A-201ENST00000385001 87 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DOBP13765 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DOBP13765 TRIAP1P1-201ENST00000427062 225 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 DAP3P1-201ENST00000441522 278 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 NIPA2P5-201ENST00000452282 464 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 SNORD5.1-201ENST00000458800 75 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 HMGN2P13-201ENST00000476476 274 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC018437.1-201ENST00000492214 406 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AK3P2-201ENST00000507976 429 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 MTCYBP40-201ENST00000509390 1135 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC026782.1-201ENST00000512952 449 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 RNA5SP341-201ENST00000516261 117 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 Y_RNA.708-201ENST00000516950 96 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 SNORA31.21-201ENST00000517180 77 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC022634.1-201ENST00000520765 532 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC010186.2-204ENST00000537668 439 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC006199.1-201ENST00000548728 219 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC009314.1-201ENST00000603871 304 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AC019193.3-201ENST00000609144 554 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 AL133215.3-201ENST00000609801 448 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DOBP13765 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DOBP13765 MTND4P23-201ENST00000447723 1363 ntBASIC2.61□□□□□ -1.99
HLA-DOBP13765 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DOBP13765 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DOBP13765 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HLA-DOBP13765 RNU6-942P-201ENST00000363002 107 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 Y_RNA.151-201ENST00000363566 112 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 RNU6-1280P-201ENST00000365211 107 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 SNORA70.4-201ENST00000365509 134 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 RNU6-933P-201ENST00000384424 107 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 RNU6-306P-201ENST00000384617 107 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 RPS29P13-201ENST00000402041 169 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 AL138885.1-201ENST00000405921 675 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 RNU6-325P-201ENST00000411132 105 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 AF228730.4-201ENST00000421457 183 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DOBP13765 RPS15AP5-201ENST00000436276 388 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 RNU7-152P-201ENST00000458982 64 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 Y_RNA.653-201ENST00000459091 95 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 U8.21-201ENST00000459536 136 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 MTND4LP22-201ENST00000508209 276 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 Y_RNA.701-201ENST00000516812 110 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 RNU6-711P-201ENST00000517255 106 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DOBP13765 AP002404.1-201ENST00000532005 451 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 AL163153.1-201ENST00000554223 283 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DOBP13765 CPDP1-201ENST00000579660 283 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 VN1R107P-201ENST00000601784 209 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 AC133104.2-201ENST00000615272 193 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 AC084781.2-201ENST00000615568 161 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 PISRT1.1-201ENST00000616930 107 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DOBP13765 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
HLA-DOBP13765 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DOBP13765 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DOBP13765 KPNA2P1-201ENST00000458289 1591 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DOBP13765 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DOBP13765 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
HLA-DOBP13765 AL353743.1-202ENST00000431724 1695 ntBASIC2.6□□□□□ -1.99
HLA-DOBP13765 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DOBP13765 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DOBP13765 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 GABRG2-229ENST00000641017 3628 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
HLA-DOBP13765 AP003122.5-201ENST00000527668 3766 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RPL9P7-201ENST00000330965 580 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RNU1-35P-201ENST00000362782 153 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RNA5SP387-201ENST00000364226 106 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 Y_RNA.419-201ENST00000384041 102 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RNU6-790P-201ENST00000384479 105 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 Y_RNA.594-201ENST00000410373 140 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RNU6-1050P-201ENST00000410388 107 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC022018.1-201ENST00000430685 241 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AL513043.1-201ENST00000439124 535 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC124916.1-201ENST00000444020 547 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AL031183.1-201ENST00000457667 207 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RPL9P9-202ENST00000466501 579 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC116655.1-201ENST00000508324 901 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RNA5SP385-201ENST00000515947 110 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RNU6-1170P-201ENST00000515974 106 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 SNORD19.2-201ENST00000516978 73 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DOBP13765 CR383656.8-201ENST00000549046 145 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC103996.1-201ENST00000555468 102 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AL121821.2-201ENST00000556081 394 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms