Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC123912.5-201ENST00000605470 343 ntBASIC1.3□□□□□ -2.2
COL11A1P12107 AC135507.1-201ENST00000607214 561 ntBASIC1.3□□□□□ -2.2
COL11A1P12107 uc_338.14-201ENST00000613162 166 ntBASIC1.3□□□□□ -2.2
COL11A1P12107 AC008443.7-201ENST00000622195 246 ntBASIC1.3□□□□□ -2.2
COL11A1P12107 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
COL11A1P12107 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.29□□□□□ -2.2
COL11A1P12107 RNU1-133P-201ENST00000364867 167 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
COL11A1P12107 RNU6-140P-201ENST00000384566 108 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 U8.14-201ENST00000390843 143 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 SNORA26.8-201ENST00000391306 124 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.29□□□□□ -2.2
COL11A1P12107 PIGFP2-201ENST00000421400 651 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 BPY2DP-201ENST00000422208 265 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AL365203.2-201ENST00000423444 196 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.29□□□□□ -2.2
COL11A1P12107 AL591704.1-201ENST00000432574 275 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 GPM6BP3-201ENST00000442797 145 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.29□□□□□ -2.2
COL11A1P12107 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.29□□□□□ -2.2
COL11A1P12107 MTND1P22-201ENST00000510572 951 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
COL11A1P12107 RNU6-405P-201ENST00000516637 110 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 RNU2-44P-201ENST00000516795 194 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 MTND4LP18-201ENST00000526864 291 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.29□□□□□ -2.2
COL11A1P12107 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.29□□□□□ -2.2
COL11A1P12107 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.29□□□□□ -2.2
COL11A1P12107 AC174048.1-201ENST00000603389 144 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AL022161.1-201ENST00000604390 213 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.29□□□□□ -2.2
COL11A1P12107 AC090970.3-201ENST00000612566 866 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC008498.1-201ENST00000613012 531 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AL158063.1-201ENST00000615349 536 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AL603758.1-201ENST00000618654 241 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.29□□□□□ -2.2
COL11A1P12107 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.29□□□□□ -2.2
COL11A1P12107 TEX21P-201ENST00000447107 1476 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC092125.1-201ENST00000562568 1995 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 FGF7P2-201ENST00000332473 296 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 U3.4-201ENST00000363352 213 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 RNU5F-7P-201ENST00000363696 115 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 SNORD114-27-201ENST00000363766 70 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 RNU4-38P-201ENST00000364472 129 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 SMIM11P1-201ENST00000369586 178 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 MRPL42P2-201ENST00000403169 426 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 RNU2-66P-201ENST00000410650 161 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 RNU2-8P-201ENST00000410727 190 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 CYCSP33-201ENST00000414485 327 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 UBE2FP1-201ENST00000416536 447 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 MTATP6P30-201ENST00000443540 664 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 MTND2P22-201ENST00000444325 1033 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.29□□□□□ -2.2
COL11A1P12107 AC010631.1-201ENST00000474150 156 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.29□□□□□ -2.2
COL11A1P12107 RNU2-10P-201ENST00000516375 211 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AP003122.4-201ENST00000530980 758 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.29□□□□□ -2.2
COL11A1P12107 HSBP1P1-201ENST00000555205 166 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.29□□□□□ -2.2
COL11A1P12107 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.29□□□□□ -2.2
COL11A1P12107 AL391840.1-201ENST00000571144 367 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC137800.2-201ENST00000574375 120 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 PIGPP4-201ENST00000584447 307 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AL096840.1-201ENST00000603287 93 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC098614.4-201ENST00000607601 462 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC239868.4-201ENST00000608318 671 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 AC092192.1-201ENST00000633154 1018 ntBASIC1.29□□□□□ -2.2
COL11A1P12107 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
COL11A1P12107 U8.3-201ENST00000363321 132 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 Y_RNA.194-201ENST00000363985 102 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 RNU4-41P-201ENST00000364426 143 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 RNU6-108P-201ENST00000365558 107 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 MIR520E-201ENST00000384867 87 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
COL11A1P12107 RNU6-750P-201ENST00000390946 107 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 SNORA40.3-201ENST00000390964 122 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AL512604.1-201ENST00000404812 257 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.28□□□□□ -2.2
COL11A1P12107 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.28□□□□□ -2.2
COL11A1P12107 GTF2IP20-201ENST00000431663 360 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 HMGN1P33-201ENST00000432945 451 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.28□□□□□ -2.2
COL11A1P12107 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.28□□□□□ -2.2
COL11A1P12107 snoU109.1-201ENST00000459339 135 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AP000797.1-201ENST00000478870 387 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 RNA5SP436-201ENST00000516020 115 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 NRON-201ENST00000517270 370 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.28□□□□□ -2.2
COL11A1P12107 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.28□□□□□ -2.2
COL11A1P12107 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.28□□□□□ -2.2
COL11A1P12107 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.28□□□□□ -2.2
COL11A1P12107 HMGN1P30-201ENST00000589286 268 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AC040904.1-201ENST00000590850 223 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AC078899.2-201ENST00000595282 212 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.28□□□□□ -2.2
COL11A1P12107 AL590229.1-201ENST00000603497 542 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AC104073.3-201ENST00000610942 955 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 AC104010.1-201ENST00000616889 150 ntBASIC1.28□□□□□ -2.2
COL11A1P12107 U2.21-201ENST00000637295 81 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms