Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 U6.99-201ENST00000637524 83 ntBASIC2.13□□□□□ -2.07
TOP1P11387 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TOP1P11387 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
TOP1P11387 Y_RNA.22-201ENST00000362492 102 ntBASIC2.12□□□□□ -2.07
TOP1P11387 RNU1-72P-201ENST00000362976 153 ntBASIC2.12□□□□□ -2.07
TOP1P11387 RNU6-623P-201ENST00000363143 105 ntBASIC2.12□□□□□ -2.07
TOP1P11387 RNU6-188P-201ENST00000364207 107 ntBASIC2.12□□□□□ -2.07
TOP1P11387 RNU6-282P-201ENST00000365357 103 ntBASIC2.12□□□□□ -2.07
TOP1P11387 MIR561-201ENST00000385216 97 ntBASIC2.12□□□□□ -2.07
TOP1P11387 MIR1294-201ENST00000408503 142 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AL030996.1-201ENST00000411430 235 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC127391.1-201ENST00000411737 98 ntBASIC2.12□□□□□ -2.07
TOP1P11387 MTCO3P41-201ENST00000414801 328 ntBASIC2.12□□□□□ -2.07
TOP1P11387 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.12□□□□□ -2.07
TOP1P11387 AC010975.2-201ENST00000427781 588 ntBASIC2.12□□□□□ -2.07
TOP1P11387 RPL31P35-201ENST00000431058 377 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.12□□□□□ -2.07
TOP1P11387 AL451074.3-201ENST00000437709 472 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.12□□□□□ -2.07
TOP1P11387 DNAJC19P4-201ENST00000440115 345 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.12□□□□□ -2.07
TOP1P11387 AC104564.1-201ENST00000493028 407 ntBASIC2.12□□□□□ -2.07
TOP1P11387 FAM92A1P2-202ENST00000504766 877 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC091133.4-201ENST00000511142 308 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.12□□□□□ -2.07
TOP1P11387 Y_RNA.655-201ENST00000515919 96 ntBASIC2.12□□□□□ -2.07
TOP1P11387 SCARNA24.1-201ENST00000516465 137 ntBASIC2.12□□□□□ -2.07
TOP1P11387 MTCO2P4-201ENST00000517968 247 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AP006587.4-201ENST00000526053 529 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC022880.1-201ENST00000534017 973 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.12□□□□□ -2.07
TOP1P11387 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.12□□□□□ -2.07
TOP1P11387 MIR3682-201ENST00000581338 84 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.12□□□□□ -2.07
TOP1P11387 AC078795.2-201ENST00000602835 1252 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC109347.2-201ENST00000610220 349 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AL133173.2-201ENST00000614270 90 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC136475.10-201ENST00000620253 385 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC139792.2-201ENST00000624218 587 ntBASIC2.12□□□□□ -2.07
TOP1P11387 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TOP1P11387 SNORD56.2-201ENST00000363242 71 ntBASIC2.11□□□□□ -2.07
TOP1P11387 SNORA16.1-201ENST00000364597 132 ntBASIC2.11□□□□□ -2.07
TOP1P11387 RNU6-1280P-201ENST00000365211 107 ntBASIC2.11□□□□□ -2.07
TOP1P11387 SMIM11P1-201ENST00000369586 178 ntBASIC2.11□□□□□ -2.07
TOP1P11387 SNORA20.2-201ENST00000383922 131 ntBASIC2.11□□□□□ -2.07
TOP1P11387 RNU6-701P-201ENST00000384059 107 ntBASIC2.11□□□□□ -2.07
TOP1P11387 SNORA40.19-201ENST00000390846 128 ntBASIC2.11□□□□□ -2.07
TOP1P11387 RNU2-16P-201ENST00000410712 136 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.11□□□□□ -2.07
TOP1P11387 PIGFP2-201ENST00000421400 651 ntBASIC2.11□□□□□ -2.07
TOP1P11387 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AL358934.1-201ENST00000432346 324 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC119618.1-201ENST00000434191 222 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC073614.1-201ENST00000438690 650 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AL353689.1-201ENST00000438895 199 ntBASIC2.11□□□□□ -2.07
TOP1P11387 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.11□□□□□ -2.07
TOP1P11387 HMGN2P23-201ENST00000456759 269 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.11□□□□□ -2.07
TOP1P11387 AC108210.2-201ENST00000503681 201 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.11□□□□□ -2.07
TOP1P11387 AC116655.1-201ENST00000508324 901 ntBASIC2.11□□□□□ -2.07
TOP1P11387 Vault.3-201ENST00000516676 95 ntBASIC2.11□□□□□ -2.07
TOP1P11387 RNU6-548P-201ENST00000517083 115 ntBASIC2.11□□□□□ -2.07
TOP1P11387 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
TOP1P11387 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.11□□□□□ -2.07
TOP1P11387 AC107953.1-201ENST00000522216 297 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AP003072.2-201ENST00000527756 676 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.11□□□□□ -2.07
TOP1P11387 AC087883.1-201ENST00000551882 391 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC007375.1-201ENST00000554513 578 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AL022154.1-201ENST00000604698 785 ntBASIC2.11□□□□□ -2.07
TOP1P11387 NDUFA8P1-201ENST00000605525 367 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC025754.2-201ENST00000606491 432 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AP002360.4-201ENST00000606980 481 ntBASIC2.11□□□□□ -2.07
TOP1P11387 RNU6-91P-201ENST00000607774 107 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC104073.3-201ENST00000610942 955 ntBASIC2.11□□□□□ -2.07
TOP1P11387 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.11□□□□□ -2.07
TOP1P11387 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
TOP1P11387 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.11□□□□□ -2.07
TOP1P11387 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TOP1P11387 RNU6-960P-201ENST00000364056 120 ntBASIC2.1□□□□□ -2.07
TOP1P11387 Y_RNA.582-201ENST00000391023 95 ntBASIC2.1□□□□□ -2.07
TOP1P11387 RNU2-8P-201ENST00000410727 190 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AC114491.1-201ENST00000416095 246 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.1□□□□□ -2.07
TOP1P11387 AC096920.1-201ENST00000423991 241 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.1□□□□□ -2.07
TOP1P11387 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
TOP1P11387 AC132479.1-201ENST00000449160 144 ntBASIC2.1□□□□□ -2.07
TOP1P11387 RNU2-10P-201ENST00000516375 211 ntBASIC2.1□□□□□ -2.07
TOP1P11387 RNU5B-3P-201ENST00000516601 115 ntBASIC2.1□□□□□ -2.07
TOP1P11387 ACA59.2-201ENST00000517061 156 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.1□□□□□ -2.07
TOP1P11387 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.1□□□□□ -2.07
TOP1P11387 RPS3AP4-201ENST00000555161 764 ntBASIC2.1□□□□□ -2.07
TOP1P11387 LINC00933-203ENST00000559812 219 ntBASIC2.1□□□□□ -2.07
TOP1P11387 MIR4782-201ENST00000577987 79 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.1□□□□□ -2.07
TOP1P11387 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms