Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC091489.2-201ENST00000566263 604 ntBASIC1.54□□□□□ -2.16
THRAP10827 MIR548AC-201ENST00000585049 88 ntBASIC1.54□□□□□ -2.16
THRAP10827 AL353778.1-201ENST00000603149 408 ntBASIC1.54□□□□□ -2.16
THRAP10827 SEPT7P9-203ENST00000604116 343 ntBASIC1.54□□□□□ -2.16
THRAP10827 TUSC7.1-201ENST00000610969 165 ntBASIC1.54□□□□□ -2.16
THRAP10827 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.54□□□□□ -2.16
THRAP10827 SCARNA4-202ENST00000625402 129 ntBASIC1.54□□□□□ -2.16
THRAP10827 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.54□□□□□ -2.16
THRAP10827 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
THRAP10827 RNU6-500P-201ENST00000362349 107 ntBASIC1.53□□□□□ -2.16
THRAP10827 RNU6-655P-201ENST00000362858 107 ntBASIC1.53□□□□□ -2.16
THRAP10827 SNORD14B-201ENST00000364533 90 ntBASIC1.53□□□□□ -2.16
THRAP10827 RNU6-533P-201ENST00000384144 107 ntBASIC1.53□□□□□ -2.16
THRAP10827 RNU6-622P-201ENST00000384272 103 ntBASIC1.53□□□□□ -2.16
THRAP10827 RNU6-611P-201ENST00000384276 104 ntBASIC1.53□□□□□ -2.16
THRAP10827 MIR10A-201ENST00000385043 110 ntBASIC1.53□□□□□ -2.16
THRAP10827 AL365400.1-201ENST00000431854 640 ntBASIC1.53□□□□□ -2.16
THRAP10827 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
THRAP10827 Z73417.1-201ENST00000447373 778 ntBASIC1.53□□□□□ -2.16
THRAP10827 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.53□□□□□ -2.16
THRAP10827 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.53□□□□□ -2.16
THRAP10827 snoU109.2-201ENST00000459316 135 ntBASIC1.53□□□□□ -2.16
THRAP10827 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
THRAP10827 AP000797.1-201ENST00000478870 387 ntBASIC1.53□□□□□ -2.16
THRAP10827 CYCSP27-201ENST00000527643 293 ntBASIC1.53□□□□□ -2.16
THRAP10827 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.53□□□□□ -2.16
THRAP10827 PCMTD1P2-201ENST00000565017 355 ntBASIC1.53□□□□□ -2.16
THRAP10827 MTCYBP33-201ENST00000575007 1130 ntBASIC1.53□□□□□ -2.16
THRAP10827 MIR4781-201ENST00000585250 76 ntBASIC1.53□□□□□ -2.16
THRAP10827 AL645939.4-201ENST00000604495 135 ntBASIC1.53□□□□□ -2.16
THRAP10827 AL158032.1-201ENST00000605401 106 ntBASIC1.53□□□□□ -2.16
THRAP10827 AL359821.1-201ENST00000605519 182 ntBASIC1.53□□□□□ -2.16
THRAP10827 AL139286.2-201ENST00000606838 396 ntBASIC1.53□□□□□ -2.16
THRAP10827 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
THRAP10827 OR4G2P-201ENST00000328113 903 ntBASIC1.52□□□□□ -2.17
THRAP10827 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
THRAP10827 SNORD3E-201ENST00000362899 217 ntBASIC1.52□□□□□ -2.17
THRAP10827 RNU6-1210P-201ENST00000363775 107 ntBASIC1.52□□□□□ -2.17
THRAP10827 RNU6-546P-201ENST00000383991 107 ntBASIC1.52□□□□□ -2.17
THRAP10827 RNA5SP465-201ENST00000391195 109 ntBASIC1.52□□□□□ -2.17
THRAP10827 RNA5SP390-201ENST00000410191 113 ntBASIC1.52□□□□□ -2.17
THRAP10827 RNU2-23P-201ENST00000410545 195 ntBASIC1.52□□□□□ -2.17
THRAP10827 RNU2-32P-201ENST00000411193 191 ntBASIC1.52□□□□□ -2.17
THRAP10827 OR9R1P-201ENST00000412200 877 ntBASIC1.52□□□□□ -2.17
THRAP10827 AC074117.2-201ENST00000417130 397 ntBASIC1.52□□□□□ -2.17
THRAP10827 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.52□□□□□ -2.17
THRAP10827 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.52□□□□□ -2.17
THRAP10827 AC119618.1-201ENST00000434191 222 ntBASIC1.52□□□□□ -2.17
THRAP10827 HMGB1P31-201ENST00000437242 427 ntBASIC1.52□□□□□ -2.17
THRAP10827 CALM1P1-201ENST00000442082 433 ntBASIC1.52□□□□□ -2.17
THRAP10827 AC245102.2-201ENST00000448956 180 ntBASIC1.52□□□□□ -2.17
THRAP10827 SNORD11.1-201ENST00000459482 85 ntBASIC1.52□□□□□ -2.17
THRAP10827 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.52□□□□□ -2.17
THRAP10827 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.52□□□□□ -2.17
THRAP10827 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.52□□□□□ -2.17
THRAP10827 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.52□□□□□ -2.17
THRAP10827 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
THRAP10827 AL670379.2-201ENST00000604983 252 ntBASIC1.52□□□□□ -2.17
THRAP10827 AL670379.4-201ENST00000605279 254 ntBASIC1.52□□□□□ -2.17
THRAP10827 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
THRAP10827 RNU6-87P-201ENST00000607561 108 ntBASIC1.52□□□□□ -2.17
THRAP10827 AL359314.1-201ENST00000616913 261 ntBASIC1.52□□□□□ -2.17
THRAP10827 AC092140.2-201ENST00000618027 521 ntBASIC1.52□□□□□ -2.17
THRAP10827 AC090517.3-201ENST00000625170 141 ntBASIC1.52□□□□□ -2.17
THRAP10827 AC092192.1-201ENST00000633154 1018 ntBASIC1.52□□□□□ -2.17
THRAP10827 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.51□□□□□ -2.17
THRAP10827 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
THRAP10827 RNU6-501P-201ENST00000364072 100 ntBASIC1.51□□□□□ -2.17
THRAP10827 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
THRAP10827 SNORD116-20-201ENST00000384529 92 ntBASIC1.51□□□□□ -2.17
THRAP10827 SNORA8-201ENST00000384574 139 ntBASIC1.51□□□□□ -2.17
THRAP10827 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
THRAP10827 CBX3P9-201ENST00000402326 552 ntBASIC1.51□□□□□ -2.17
THRAP10827 RNA5SP247-201ENST00000411181 105 ntBASIC1.51□□□□□ -2.17
THRAP10827 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.51□□□□□ -2.17
THRAP10827 AC098592.1-201ENST00000419352 333 ntBASIC1.51□□□□□ -2.17
THRAP10827 BX510359.4-201ENST00000423750 193 ntBASIC1.51□□□□□ -2.17
THRAP10827 ISCA1P6-201ENST00000427740 390 ntBASIC1.51□□□□□ -2.17
THRAP10827 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.51□□□□□ -2.17
THRAP10827 AL121594.1-201ENST00000475906 575 ntBASIC1.51□□□□□ -2.17
THRAP10827 AP001025.1-201ENST00000486139 332 ntBASIC1.51□□□□□ -2.17
THRAP10827 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.51□□□□□ -2.17
THRAP10827 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
THRAP10827 RN7SKP256-201ENST00000517201 314 ntBASIC1.51□□□□□ -2.17
THRAP10827 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.51□□□□□ -2.17
THRAP10827 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.51□□□□□ -2.17
THRAP10827 AL078605.1-201ENST00000603529 500 ntBASIC1.51□□□□□ -2.17
THRAP10827 AP000240.1-201ENST00000609910 452 ntBASIC1.51□□□□□ -2.17
THRAP10827 AC012409.4-201ENST00000612923 249 ntBASIC1.51□□□□□ -2.17
THRAP10827 AC093648.1-201ENST00000623546 606 ntBASIC1.51□□□□□ -2.17
THRAP10827 AC006927.3-201ENST00000638789 384 ntBASIC1.51□□□□□ -2.17
THRAP10827 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
THRAP10827 FARSBP1-201ENST00000435808 1778 ntBASIC1.5□□□□□ -2.17
THRAP10827 MIR126-201ENST00000362291 85 ntBASIC1.5□□□□□ -2.17
THRAP10827 RNU6-1214P-201ENST00000363650 109 ntBASIC1.5□□□□□ -2.17
THRAP10827 RNU6-1274P-201ENST00000384557 107 ntBASIC1.5□□□□□ -2.17
THRAP10827 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
THRAP10827 MRPL42P2-201ENST00000403169 426 ntBASIC1.5□□□□□ -2.17
THRAP10827 AL033519.2-201ENST00000403958 392 ntBASIC1.5□□□□□ -2.17
THRAP10827 RNU2-48P-201ENST00000410694 191 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms