Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIR3144-201ENST00000579460 79 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 MIR5195-201ENST00000583555 115 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 AC104465.1-201ENST00000611365 139 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 AC011476.5-201ENST00000615594 130 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 RNA5SP51-201ENST00000364750 119 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 RNU5E-7P-201ENST00000365290 117 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.405-201ENST00000383979 100 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.451-201ENST00000384200 100 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.524-201ENST00000384564 100 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.561-201ENST00000384694 100 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 SNORA12.2-201ENST00000391040 156 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 SNORA11.2-201ENST00000408318 127 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-651P-201ENST00000411040 105 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-703P-201ENST00000516946 107 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 RPL21P7-201ENST00000557463 483 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 MIR5187-201ENST00000583479 76 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 BRDTP1-201ENST00000605735 677 ntBASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CSB-PGBD3P0DP91 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.292-201ENST00000364904 97 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.398-201ENST00000383952 99 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-735P-201ENST00000410612 107 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 RNU2-51P-201ENST00000410708 197 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 AL591043.1-201ENST00000432461 424 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 COX6CP14-201ENST00000469580 174 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-377P-201ENST00000515965 102 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-1012P-201ENST00000516606 109 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 AL139395.1-201ENST00000603662 160 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 AC011921.3-201ENST00000605540 361 ntBASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CSB-PGBD3P0DP91 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-428P-201ENST00000362942 107 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-72P-201ENST00000384285 79 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-1117P-201ENST00000384525 104 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 SNORA3C-201ENST00000408792 125 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-394P-201ENST00000410735 107 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 RNU1-103P-201ENST00000516502 125 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-1183P-201ENST00000517054 60 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 IGKV2-38-201ENST00000517443 247 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 H3F3AP1-201ENST00000559984 334 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 AL110115.1-201ENST00000614396 364 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 AC004825.2-201ENST00000616634 455 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 U6.106-201ENST00000636360 105 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 MAPK10-372ENST00000641954 3413 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 AL672296.1-201ENST00000427780 2158 ntBASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.12□□□□□ -1.59
CSB-PGBD3P0DP91 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 RNU1-108P-201ENST00000362556 161 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.304-201ENST00000365011 112 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-658P-201ENST00000384606 106 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 U3.39-201ENST00000408569 239 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 AL353748.1-201ENST00000440753 474 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 RN7SKP210-201ENST00000459176 261 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 RPS4XP13-201ENST00000483219 789 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 AP006245.1-201ENST00000522549 120 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 AC100770.1-201ENST00000532310 322 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 MRPS18CP4-201ENST00000535821 231 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 CYCSP39-201ENST00000565821 309 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 SCARNA4-202ENST00000625402 129 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 BX322639.1-202ENST00000423987 2213 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 AC022336.2-201ENST00000568966 2538 ntBASIC5.11□□□□□ -1.59
CSB-PGBD3P0DP91 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 FAM35BP-202ENST00000497389 3337 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms